Transcript: PGSC0003DMT400076498
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Description
Nodulin [Source:PGSC_GENE;Acc:PGSC0003DMG400029744]
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- PGSC0003DMT400076498 863 217aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M1CWV4 A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical,
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1 A TTTCTACTATAATTTTATTTTCCACTTTCTTCA ATG GCA TCC ATA ACA AAT ATC CAA GA 60
..................................ATGGCATCCATAACAAATATCCAAGA 26
..................................-M--A--S--I--T--N--I--Q--E 9
61 A TTA TCC AAA GAT CAT GAT ATA GAA AAA CAA TCG AAC AAT ATG GAA GTA GAA CAA AAC CT 120
27 ATTATCCAAAGATCATGATATAGAAAAACAATCGAACAATATGGAAGTAGAACAAAACCT 86
9 --L--S--K--D--H--D--I--E--K--Q--S--N--N--M--E--V--E--Q--N--L 29
121 A GAG GTT TTA ATA GTA GAT TAC TCA AAA AGA GCA CAA TGG CTT AGG GCA GCA GTA TTA GG 180
87 AGAGGTTTTAATAGTAGATTACTCAAAAAGAGCACAATGGCTTAGGGCAGCAGTATTAGG 146
29 --E--V--L--I--V--D--Y--S--K--R--A--Q--W--L--R--A--A--V--L--G 49
181 T GCA AAC GAT GGA TTA CTC TCA ACA TCA TCT TTA ATG ATG GGA ATA GGA GCA ATT CAT CA 240
147 TGCAAACGATGGATTACTCTCAACATCATCTTTAATGATGGGAATAGGAGCAATTCATCA 206
49 --A--N--D--G--L--L--S--T--S--S--L--M--M--G--I--G--A--I--H--Q 69
241 A GAT TCA AAG TCC ATG ATC CTC ACC GGT ATC GCG GGG CTC GTA GCA GGA GCA TGT AGC AT 300
207 AGATTCAAAGTCCATGATCCTCACCGGTATCGCGGGGCTCGTAGCAGGAGCATGTAGCAT 266
69 --D--S--K--S--M--I--L--T--G--I--A--G--L--V--A--G--A--C--S--M 89
301 G GCT ATA GGT GAA TTT GTG TCC GTT TAT TCG CAG TAT GAC ATA GAA ATG TCA CAA ATT AA 360
267 GGCTATAGGTGAATTTGTGTCCGTTTATTCGCAGTATGACATAGAAATGTCACAAATTAA 326
89 --A--I--G--E--F--V--S--V--Y--S--Q--Y--D--I--E--M--S--Q--I--K 109
361 A AGA GAA AAC GCG ATA GAA TTA TTT GAA GAA AAA AAG AAG AAG TTG CCT AGT CCT GTA CA 420
327 AAGAGAAAACGCGATAGAATTATTTGAAGAAAAAAAGAAGAAGTTGCCTAGTCCTGTACA 386
109 --R--E--N--A--I--E--L--F--E--E--K--K--K--K--L--P--S--P--V--Q 129
421 A GCT GCG GGT GCA TCT GCT TTT GCA TTT GCA ATA GGT GCA ATT GTA CCT TTA TTA GGT GC 480
387 AGCTGCGGGTGCATCTGCTTTTGCATTTGCAATAGGTGCAATTGTACCTTTATTAGGTGC 446
129 --A--A--G--A--S--A--F--A--F--A--I--G--A--I--V--P--L--L--G--A 149
481 T GCT TTT GTG AAG GAT TAT CAT GTG AGA TTA GGA GTT GTG GTT GGT GTT GTT AGC TTA GC 540
447 TGCTTTTGTGAAGGATTATCATGTGAGATTAGGAGTTGTGGTTGGTGTTGTTAGCTTAGC 506
149 --A--F--V--K--D--Y--H--V--R--L--G--V--V--V--G--V--V--S--L--A 169
541 A CTT TTA GGG TTT GGA GGG TTA AGT GCA TAC TTA GGG AAA GCA CCA TTC GTT AAG TCT TC 600
507 ACTTTTAGGGTTTGGAGGGTTAAGTGCATACTTAGGGAAAGCACCATTCGTTAAGTCTTC 566
169 --L--L--G--F--G--G--L--S--A--Y--L--G--K--A--P--F--V--K--S--S 189
601 A TTA AGA GTG TTG ATT GGT GGA TGG TTG GCT ATG GGA ATC ACT TTT GGA TTT ACT AAA TT 660
567 ATTAAGAGTGTTGATTGGTGGATGGTTGGCTATGGGAATCACTTTTGGATTTACTAAATT 626
189 --L--R--V--L--I--G--G--W--L--A--M--G--I--T--F--G--F--T--K--L 209
661 A GTT GGT GTT ACT GGA CTT TAT GGT TAA TTAATTAATTAATTAAAACTATATATAATTTA 720
627 AGTTGGTGTTACTGGACTTTATGGTTAA................................ 654
209 --V--G--V--T--G--L--Y--G--*-................................ 217
721 CTTTTACGTTAAAATAAATTAAAGGTCATGTCCCAGTATACCTAGATTTGTTCTTTTTCT 780
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781 TTCCCCTTGTTATAATTACATGTATGTTGAGTGAGGATTTTTAGTCAATTTGATAATGTA 840
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841 ATGAAAGAATCCGTTTGTTGTGC 863
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