Transcript: PGSC0003DMT400057757
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Description
Bromodomain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022422]
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- PGSC0003DMT400057758 2145 492aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M1C1L5 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical, - PGSC0003DMT400057757 1655 224aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M1C1L4 - -
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
1 GCTTTTTCTTGACTTCGTGTTTTCTATGCTTAAGTTTGCCTACCTTTAACCATACTCTAC 60
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61 GATATGCTAATTTGAGTCATCGACAAATAACTTCAATTGCAGGCCTGCAAAGCCAGGTAT 120
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121 GAGGAATTACGTAAGCGCTACTCTGGATGCAC T GCTTTGTTTGAAGAGTTGCGGAAGCGA 180
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181 CGAGTGGAAGAATTGAAGCGGGAATTGGTGAGATCTGAGAGCTCCATTGG G TCTCTTGAG 240
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241 TCAAAGATTGAAAGGCTACAGGCTGAGAGAGAGCGATCTGATCAGATAGACCACGGTTTG 300
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301 AGTCACGCTGAATCTCCTGCTCCTCTGACAAAATCAGAAGATATTGAGTCTTCTGTGAAA 360
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361 GAAGAAGCAAAGGATGGGTTGTCTGCTGGCAGCTTCACACTTGATATTAGAACAGACGGG 420
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421 ACCCCTGAGTCTCAGGTTCCCACCATACCCTCAGCTACAGAGACAGTCGTGAAGCTAGAA 480
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481 CTTTCAGAGTCTTGGGGACGGGACAAAGCTCCAAGTACAAGCAAGGTTCCAGAGTCTGCC 540
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541 AATGGAAATGGTGGGGCTGTGAGGAAGAGAAGAGGTAAGAGGAGAAGAAAAGACACGGTT 600
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601 TGGGATGCCAAAGAAGGGAGCATTGAGGACAGTGACAATGTATGTTCAACGAGTCTCGCC 660
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661 TCCACTTCTCACTGTAAAGAAGTACTAACCAGTTGTGATCAGAGTATTAGGCGTTCTGCT 720
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721 GCAAGTGATCATATAGTAGGTATATCTAGGTTTAGGAACGATGACTTG ATG AAG ATT TTC 780
................................................ATGAAGATTTTC 12
................................................-M--K--I--F- 4
781 AAT TCT ATT ACA CAG CAT GAA GCT GCT ATG GTC TTC AGG CAT CGT CTT GAT AGT CAG AAG 840
13 AATTCTATTACACAGCATGAAGCTGCTATGGTCTTCAGGCATCGTCTTGATAGTCAGAAG 72
5 -N--S--I--T--Q--H--E--A--A--M--V--F--R--H--R--L--D--S--Q--K- 24
841 AGA GCA AGA TAC AAG AAA ATG ATA AGG CGT CAT ATG GAT ATC GAA ACA GCA AGA TCA AGA 900
73 AGAGCAAGATACAAGAAAATGATAAGGCGTCATATGGATATCGAAACAGCAAGATCAAGA 132
25 -R--A--R--Y--K--K--M--I--R--R--H--M--D--I--E--T--A--R--S--R- 44
901 CTA GCC AAC TGG TCC ATC AAA ACA CCA GGT GAA CTC TTC AGA GAT TTC CTT TTA CTA GCC 960
133 CTAGCCAACTGGTCCATCAAAACACCAGGTGAACTCTTCAGAGATTTCCTTTTACTAGCC 192
45 -L--A--N--W--S--I--K--T--P--G--E--L--F--R--D--F--L--L--L--A- 64
961 AAC AAT GCC ATG GTA TTT TAC TCG AAG AGA ACG AGA GAA TAC AAA GCA GCA ATG GCC CTA 1020
193 AACAATGCCATGGTATTTTACTCGAAGAGAACGAGAGAATACAAAGCAGCAATGGCCCTA 252
65 -N--N--A--M--V--F--Y--S--K--R--T--R--E--Y--K--A--A--M--A--L- 84
1021 AGA GAC ATT GTC ACT AGA GCC TAT CGG GAA CAT TAC AAA GGC TCT TAC CAC AAA GCT ACA 1080
253 AGAGACATTGTCACTAGAGCCTATCGGGAACATTACAAAGGCTCTTACCACAAAGCTACA 312
85 -R--D--I--V--T--R--A--Y--R--E--H--Y--K--G--S--Y--H--K--A--T- 104
1081 TCA TCA CAC CTT CCA TTG CCA ATA ATT GGT AAT CCA CCT GGG AAG CCA CGA AGT GTT CGC 1140
313 TCATCACACCTTCCATTGCCAATAATTGGTAATCCACCTGGGAAGCCACGAAGTGTTCGC 372
105 -S--S--H--L--P--L--P--I--I--G--N--P--P--G--K--P--R--S--V--R- 124
1141 CCT CGT CCT TCT AAA GAC AAA CTT CAA GCC AAG TAT GGC AAC AAC ATC ACT GCT GGA ACA 1200
373 CCTCGTCCTTCTAAAGACAAACTTCAAGCCAAGTATGGCAACAACATCACTGCTGGAACA 432
125 -P--R--P--S--K--D--K--L--Q--A--K--Y--G--N--N--I--T--A--G--T- 144
1201 CTA GGA AGA CAG AAT CAT AGA CCT GGA GAT GCT GCT GAT TCT AAG GTA CCA TTG CAA ACT 1260
433 CTAGGAAGACAGAATCATAGACCTGGAGATGCTGCTGATTCTAAGGTACCATTGCAAACT 492
145 -L--G--R--Q--N--H--R--P--G--D--A--A--D--S--K--V--P--L--Q--T- 164
1261 CCC TTA TCA GCT AAG AAG GGC TTC AAG AGG CCC GAA AAA ATC AAG TGT GGA TCG ACT ACC 1320
493 CCCTTATCAGCTAAGAAGGGCTTCAAGAGGCCCGAAAAAATCAAGTGTGGATCGACTACC 552
165 -P--L--S--A--K--K--G--F--K--R--P--E--K--I--K--C--G--S--T--T- 184
1321 GAG ACT GTC AAT CCA CAA ACT AAA GTA CAA GCT AAG GAA TCA TCA CAA CAT AAT ATT AAG 1380
553 GAGACTGTCAATCCACAAACTAAAGTACAAGCTAAGGAATCATCACAACATAATATTAAG 612
185 -E--T--V--N--P--Q--T--K--V--Q--A--K--E--S--S--Q--H--N--I--K- 204
1381 GTT AAA AAG GAG CAT CGA GTT AAG GCT GTA ACC AAA GAG AGG AAG AGG GCT CGG CAA AAG 1440
613 GTTAAAAAGGAGCATCGAGTTAAGGCTGTAACCAAAGAGAGGAAGAGGGCTCGGCAAAAG 672
205 -V--K--K--E--H--R--V--K--A--V--T--K--E--R--K--R--A--R--Q--K- 224
1441 TAA TTTGCTGATTCCATGATCCTTGGTGTTCACTTACTTTTTGGTATAGAAATTTTCCGT 1500
673 TAA......................................................... 675
-*-......................................................... 224
1501 GTATCATAATTCAATTTTGTGTTGCCATTTTGCTCTAGGCTTCATCTTGATACAGGAGAA 1560
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1561 ATGCAGGTGTAATATAATACTAACCAAGTTGTGGATAATTAACTCCAAAATTATAGAATT 1620
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1621 GTTCCTGAACTATCTCTTCATCAGGCCCAACTATA 1655
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