Solanum tuberosum (SolTub_3.0)
Description

F-box domain containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018537]

Location
About this transcript

This transcript has 3 exons and is annotated with 12 domains and features.

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-PGSC0003DMT400047695874156aa
 
Protein coding
M1BL99 Ensembl Canonical
-PGSC0003DMT4000476931298124aa
 
Protein coding
M1BL98 -
Codons
  • Alternating codons
  • Alternating codons
Exons
  • An exon
  • Another exon
Variants
  • loading
Other
  • UTR
Markup
  • loading
                                                                          
     1 AAAAAATCCAGCACATCAAAAAGAGACAAAAAGGTGAAATAGTAAAGTGCACTCTACAAA     60
       ............................................................       
       ............................................................       

                                                                          
    61 CTGAACCAAGTTAATCTCATCCATTTTCTCAAGTCTCTTCACCCCGCACCCCACCCCACC    120
       ............................................................       
       ............................................................       

                                                                          
   121 CCCGAAACTCTGATGGAGAAGTTGCCACCTGAACTTTTTCTCAGAATTTTCTGTCTCTTG    180
       ............ATGGAGAAGTTGCCACCTGAACTTTTTCTCAGAATTTTCTGTCTCTTG     48
       ............-M--E--K--L--P--P--E--L--F--L--R--I--F--C--L--L-     16

                                                                          
   181 GATCACCGTAATCTTGCAACTGCACAATTGGTTTGCAGAAGATGGAAAATGTTGGGTTCA    240
    49 GATCACCGTAATCTTGCAACTGCACAATTGGTTTGCAGAAGATGGAAAATGTTGGGTTCA    108
    17 -D--H--R--N--L--A--T--A--Q--L--V--C--R--R--W--K--M--L--G--S-     36

                                                                          
   241 GATAACAGCTTATGGTGTGATCTGTTTATAGAGAGATGGGGATCAGATCAAGCCACTTTT    300
   109 GATAACAGCTTATGGTGTGATCTGTTTATAGAGAGATGGGGATCAGATCAAGCCACTTTT    168
    37 -D--N--S--L--W--C--D--L--F--I--E--R--W--G--S--D--Q--A--T--F-     56

                                                                          
   301 TATTCCCCTGTTGATACCAAATCATGGAAACATGTCTATATGGTTCAAGATCGTTGCGAT    360
   169 TATTCCCCTGTTGATACCAAATCATGGAAACATGTCTATATGGTTCAAGATCGTTGCGAT    228
    57 -Y--S--P--V--D--T--K--S--W--K--H--V--Y--M--V--Q--D--R--C--D-     76

                                                                          
   361 CGGAATGGATTGGGATTGAAAATTATAAGAGAAGGAGATGACTACTATCTTATACACCAG    420
   229 CGGAATGGATTGGGATTGAAAATTATAAGAGAAGGAGATGACTACTATCTTATACACCAG    288
    77 -R--N--G--L--G--L--K--I--I--R--E--G--D--D--Y--Y--L--I--H--Q-     96

                                                                          
   421 GGTGAAATTCAGAGACATTTAGGTTCAAGAAAATCGAAAATGGAAGATTTATCTGTTTCA    480
   289 GGTGAAATTCAGAGACATTTAGGTTCAAGAAAATCGAAAATGGAAGATTTATCTGTTTCA    348
    97 -G--E--I--Q--R--H--L--G--S--R--K--S--K--M--E--D--L--S--V--S-    116

                                                                          
   481 TCAGCTGACTATAAAGATGTCAAAGAGGAGGTACCAAGTTTAAGCATCTTGGACAAGATA    540
   349 TCAGCTGACTATAAAGATGTCAAAGAGGAGGTACCAAGTTTAAGCATCTTGGACAAGATA    408
   117 -S--A--D--Y--K--D--V--K--E--E--V--P--S--L--S--I--L--D--K--I-    136

                                                                          
   541 CTTTTCTTCATTGGGGACTTGGAATCTGCTTCTGTCCAGGCTAAACGAAGCCGATTGGTG    600
   409 CTTTTCTTCATTGGGGACTTGGAATCTGCTTCTGTCCAGGCTAAACGAAGCCGATTGGTG    468
   137 -L--F--F--I--G--D--L--E--S--A--S--V--Q--A--K--R--S--R--L--V-    156

                                                                          
   601 TAAAGAACTTTTCTTTTTTGAATAACAGTAGTATCTTGATCAATTTACGTGCACCTCAAT    660
   469 TAA.........................................................    471
       -*-.........................................................    156

                                                                          
   661 TATTTTGGATGGCTCCACTCCGCTCACCAAAGCTTAGGCAAATGTGAAGAAATTAGCTAA    720
       ............................................................       
       ............................................................       

                                                                          
   721 CATTTTTTTGTTTGTATCTTGTTGAAATTGTTAGTTTTATGTAATAATAAATGTTTCAAT    780
       ............................................................       
       ............................................................       

                                                                          
   781 ATATTTCCATGTTTTTGTATGCAATATGATGTATTCATTTAATCGTGATTTTAAACCCCA    840
       ............................................................       
       ............................................................       

                                                                          
   841 ACTTACTCTGTATCCAAATAGTTGTGTGCAATGG                              874
       ..................................                                 
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