Transcript: PGSC0003DMT400043109
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Description
NSFL1 cofactor p47 [Source:PGSC_GENE;Acc:PGSC0003DMG400016724]
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- PGSC0003DMT400043109 1351 304aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
M1BE38 A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical,
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1 ATTGGCACCCCCAAACAAGACAAAAGAGGAGAAGAATAAATAAATAAAAAGCCCTAGAAT 60
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61 TAGGTGATTAGTATAATCATTGAATCGAATCGTATTCCCCTCATTCTCGAAGTTGCAGCA 120
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121 ACAGAGTAGAATCA ATG TCC TCA CGC GAT AGC AAG AAA CCC TCT AGG CAA ACC TCC GGT A 180
..............ATGTCCTCACGCGATAGCAAGAAACCCTCTAGGCAAACCTCCGGTA 46
..............-M--S--S--R--D--S--K--K--P--S--R--Q--T--S--G-- 15
181 GC CGT GCC GGT GGA ATT CGT ACA CTT TCC GAT CTC AAT CGT CCA TCC GGT CAC GAT TCC G 240
47 GCCGTGCCGGTGGAATTCGTACACTTTCCGATCTCAATCGTCCATCCGGTCACGATTCCG 106
16 S--R--A--G--G--I--R--T--L--S--D--L--N--R--P--S--G--H--D--S-- 35
241 AC AGC GAT TCC GAT GGT CCC CAA GAA TAC TAC ACC GGT GGT GAA AAA AG T GGA ATG CTT G 300
107 ACAGCGATTCCGATGGTCCCCAAGAATACTACACCGGTGGTGAAAAAAGTGGAATGCTTG 166
36 D--S--D--S--D--G--P--Q--E--Y--Y--T--G--G--E--K--S--G--M--L-- 55
301 TT CAA GAT CCT TTA AAG CAT AAT GAT GTG GAC TCC ATC TTT GAC CGA GCT AGG CAA GTG G 360
167 TTCAAGATCCTTTAAAGCATAATGATGTGGACTCCATCTTTGACCGAGCTAGGCAAGTGG 226
56 V--Q--D--P--L--K--H--N--D--V--D--S--I--F--D--R--A--R--Q--V-- 75
361 GT GCC ACG CAA GGT CCT TTG GAA AAT GTC GTC CCT AGT TCA AGC TCA ACA AGC TTT ACT G 420
227 GTGCCACGCAAGGTCCTTTGGAAAATGTCGTCCCTAGTTCAAGCTCAACAAGCTTTACTG 286
76 G--A--T--Q--G--P--L--E--N--V--V--P--S--S--S--S--T--S--F--T-- 95
421 GA TCT GCG AGA ACA CTT GCA GGG GAG ACA GTG CCA ACA TCA GCT CCT CAA CCA CCC GAG T 480
287 GATCTGCGAGAACACTTGCAGGGGAGACAGTGCCAACATCAGCTCCTCAACCACCCGAGT 346
96 G--S--A--R--T--L--A--G--E--T--V--P--T--S--A--P--Q--P--P--E-- 115
481 CC ATC GTG CAC AAT ATT GTC TTC TGG AGA AAC GGT TTC ACT GTA AAT GAT GGT TCT TTG A 540
347 CCATCGTGCACAATATTGTCTTCTGGAGAAACGGTTTCACTGTAAATGATGGTTCTTTGA 406
116 S--I--V--H--N--I--V--F--W--R--N--G--F--T--V--N--D--G--S--L-- 135
541 GA AGG CTG GAT GAT CCT GAA AAT GCA TCT TTT CTG GAG AGT ATC ACA AAG TCT GAA TGT C 600
407 GAAGGCTGGATGATCCTGAAAATGCATCTTTTCTGGAGAGTATCACAAAGTCTGAATGTC 466
136 R--R--L--D--D--P--E--N--A--S--F--L--E--S--I--T--K--S--E--C-- 155
601 CT AGA GAG TTG GCT CCT GCA GAT ACC AGA TCC CAG GTG CAT TGC AAC CTC ATA AGA AGG G 660
467 CTAGAGAGTTGGCTCCTGCAGATACCAGATCCCAGGTGCATTGCAACCTCATAAGAAGGG 526
156 P--R--E--L--A--P--A--D--T--R--S--Q--V--H--C--N--L--I--R--R-- 175
661 AT GAG AAC TGT CCT G AA CCA GAG AAA CAC CAA GTT TCG TTT CAG GGA GTG GGA AGA ACA C 720
527 ATGAGAACTGTCCTGAACCAGAGAAACACCAAGTTTCGTTTCAGGGAGTGGGAAGAACAC 586
176 D--E--N--C--P--E--P--E--K--H--Q--V--S--F--Q--G--V--G--R--T-- 195
721 TT GGA AGC AGC GCA ACT CCA GCA ACT TCT GAG CCA TCT GCT TCT GCT CCC ACA AGC ACA G 780
587 TTGGAAGCAGCGCAACTCCAGCAACTTCTGAGCCATCTGCTTCTGCTCCCACAAGCACAG 646
196 L--G--S--S--A--T--P--A--T--S--E--P--S--A--S--A--P--T--S--T-- 215
781 TC CCA GCA GCT TCC ACT AGT GTT CTG GAT GAA TCA TTG CCT TCG ACC TCG CTT CAA ATT A 840
647 TCCCAGCAGCTTCCACTAGTGTTCTGGATGAATCATTGCCTTCGACCTCGCTTCAAATTA 706
216 V--P--A--A--S--T--S--V--L--D--E--S--L--P--S--T--S--L--Q--I-- 235
841 GA TTG GCA GAT GGA AGT CGC ATG GTT GCA CAC TTC AAC TTC CAC CAA ACT GTT GGT GAC A 900
707 GATTGGCAGATGGAAGTCGCATGGTTGCACACTTCAACTTCCACCAAACTGTTGGTGACA 766
236 R--L--A--D--G--S--R--M--V--A--H--F--N--F--H--Q--T--V--G--D-- 255
901 TC CGT GCC TTT ATT GAT GCT TCA AGG CCA AGT GAC ACC AGA GCA TAT CAA CTA CAA ACT G 960
767 TCCGTGCCTTTATTGATGCTTCAAGGCCAAGTGACACCAGAGCATATCAACTACAAACTG 826
256 I--R--A--F--I--D--A--S--R--P--S--D--T--R--A--Y--Q--L--Q--T-- 275
961 TT GGA TTT CCT CCT AAA ATG CTC AGT GAC CCA ACC CAA ACG ATT GAG CAA GCA GGA CTC G 1020
827 TTGGATTTCCTCCTAAAATGCTCAGTGACCCAACCCAAACGATTGAGCAAGCAGGACTCG 886
276 V--G--F--P--P--K--M--L--S--D--P--T--Q--T--I--E--Q--A--G--L-- 295
1021 CA AAT TCA GTG GTT ATA CAA AAG TTT TAG TGAGCTGCGAAAACTCTCTTTTCGTTTTATT 1080
887 CAAATTCAGTGGTTATACAAAAGTTTTAG............................... 915
296 A--N--S--V--V--I--Q--K--F--*-............................... 304
1081 ATTTCCAGACGTTTCGATCTTATTTACTACTGGATATTATTTTTAATCTTTGTGAATCTA 1140
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1141 AAGCTGTACCAAGACAGCAGCAGGTGTTGTTTAAAATTCAAATTTTCTTAAATGCAACGT 1200
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1201 TGTACGGGTCTGTCCCCCAATTATGTGTCATATGGTACTTTCATCTCCTGTAAGAACAGC 1260
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1261 TGCTGTGTGGAAATGAAGTAGAATGGTTTGTATGATTTGAGCATTCAAGACTTGGTGATA 1320
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1321 TCACAGAATATGATTTACTGATGAATTGCAG 1351
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