Solanum tuberosum (SolTub_3.0)
Description

Zinc finger, RING-type [Source:PGSC_GENE;Acc:PGSC0003DMG400022384]

Location
About this transcript

This transcript has 1 exon and is annotated with 2 domains and features.

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-PGSC0003DMT4000576451440253aa
 
Protein coding
M1C1F7 Ensembl Canonical
-PGSC0003DMT400057644971186aa
 
Protein coding
M1C1F6 -
-PGSC0003DMT40005764691373aa
 
Protein coding
M1C1F8 -
Exons/ Introns
  • Translated sequence
  • Flanking sequence
  • UTR
Markup
  • loading
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  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........gagtaggttaaattgattttaagctgtagcaatctcctaaatagtggagt
1PGSC0003DMT400057646.exon134,124,62134,123,709--913
ATTCGAAATTATTAATTTCCTGTGGAATGCGATATATGGAACTTAGTAGTACCATTTTCT
TGTTAAGGCCCTCTTTGGGGAGAATAGCAGCTCTTGCTGGTGGTCAAGTACTTTCTTTTT
TGGGTCACTATTGCACTCGTTTCTACTAGGGCGTCGTACTTTATTACTCTGCAAAATATG
TATATTCAGCATTTTCTCTCCTTTCTGTACGGCTAATTTTGCTTGTACAACTACTCAAAC
TGAGAGTTATCTAATACAATGCATTGCAGGCGTTCGAGGTCACAATCATGCCCTTTTTGC
CGCGATAGCCTTAAAAGGGTAAACTCTGGTGATCTGTGGGTATACATGGACAACAAAGAC
ATCGTGGACATGTCAACGATAACAAGGGAGAATCTGAGGAGGCTATTCATGTTTATAGAT
AAGCTACCCTTGATCGTTCCAGATAATGTTTTTGATCACTATGATACTCATATAAGGTAG
ATGAACAATGCTTTCATTGGGGGGGATTGATCATACTAAAGATCAAGAAATTGGTCTCGC
TAGATTTAGAAATGCAGGTGGATTACTTTATCACCTTCTGATTAGAAGAACCCGACCGAG
TCATCGTGGTGCAGGGGTTGAAGCCAAGTTAGATTAGCCAAAAAAATGGAGCTTTTTAAT
TGTACCTCCTAATTTGTACATGCCTGTACAGTTCCAGTTTAACTTCTTGAAAACACAAGT
GTACCCTTTTGTTGTTTGTTTTCTAATCTTCAAGTATGCCATAAATGCCAGCATTTGAGC
TTTCTCAAGTGCAGAGTTTTATGGTTGCTATTTATAAGAGTGTATAATATATGATGTACT
TAGATACCAATCTGTAATTTTCCCTTTTTTTTGCAAGCATTTGAAGTAAGGTATTGCTGT
TAATTTCTTACCC                                               
3' downstream sequence
aaggatatgaaatggttcagaaaatgaaaaagttcgcataggattttcac..........