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    Solanum tuberosum (SolTub_3.0) ▼

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    Transcript: PGSC0003DMT400054795

    Description

    Ubiquitin-conjugating enzyme E2 36 [Source:PGSC_GENE;Acc:PGSC0003DMG400021267]

    Location

    Chromosome 10: 2,336,553-2,341,951 reverse strand.

    About this transcript

    This transcript has 8 exons and is annotated with 9 domains and features.

    Gene

    This transcript is a product of gene PGSC0003DMG400021267 Show transcript tableHide transcript table

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    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -PGSC0003DMT4000547951141153aa
     
    Protein coding
    		M1BWW1 Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    • UTR
    Markup
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........aagcaataataataataataataaaaatttcaatcgaaccctattaagca
    1PGSC0003DMT400054795.exon12,341,9512,341,784-0168 
    CAAGATTTTAGTGAGAGAAACAGTGCTTCTGAAACTCTCAATCCATTTTTTCTACTTTCT
CTCTCTCTAGAAAAAGTGCATTTTAGCTTAAATTTTCTGCGAACAATTTTTTTTTTCATC
GATTCAATTTCAATGGCTAACAGCAATCTTCCTCGAAGAATTATCAAG
     Intron 1-22,341,7832,341,623161 
    gtgaatttttcctcttttttcgatc..........tggtttttttattttttatttacag
    2PGSC0003DMT400054795.exon22,341,6222,341,5950128 
    GAAACTCAGCGTCTTCTAAGTGAACCTG
     Intron 2-32,341,5942,340,2221,373 
    gtaaatatatatatctgtgatagcc..........ttgtgtggtttaactttgattgcag
    3PGSC0003DMT400054795.exon32,340,2212,340,1351187 
    CACCAGGAATAAGTGCTTCTCCCTCAGAAGAAAATATGCGATATTTTAATGTCATGATTC
TTGGTCCAACACAGTCTCCGTATGAAG
     Intron 3-42,340,1342,339,378757 
    gtaatttgctcaataaattatgcta..........tccactgcttcctgcttttgtgtag
    4PGSC0003DMT400054795.exon42,339,3772,339,3191059 
    GAGGTGTTTTCAAACTGGAACTCTTTTTGCCTGAAGAGTACCCAATGGCCGCGCCAAAG
     Intron 4-52,339,3182,337,6941,625 
    gtatttgaactcatctatggatgtt..........tgatcaagttgcatactatttacag
    5PGSC0003DMT400054795.exon52,337,6932,337,6520042 
    GTTCGATTCCTCACCAAAATCTATCATCCGAATATTGATAAG
     Intron 5-62,337,6512,337,57280 
    gtttgttctgttattcgattctgtt..........gcttatgttgaccatcattatgaag
    6PGSC0003DMT400054795.exon62,337,5712,337,4980274 
    CTTGGAAGGATATGCCTTGATATTCTCAAGGACAAGTGGAGTCCTGCTCTTCAGATTCGT
ACCGTTCTTTTGAG
     Intron 6-72,337,4972,337,360138 
    gtattaaatatcttcgataatcttt..........aacaatataggtgcttctttttcag
    7PGSC0003DMT400054795.exon72,337,3592,337,2622198 
    CATTCAAGCACTTTTGAGTGCTCCAAATCCAGATGATCCACTCTCTGAGAACATTGCAAA
GCACTGGAAGTCAAACGAGGCTGAAGCTGTTGAAACGG
     Intron 7-82,337,2612,337,138124 
    gtaatttgcctttacggtctttcca..........cagtttcctttctttaaccttgcag
    8PGSC0003DMT400054795.exon82,337,1372,336,5531-585 
    CTAAAGAATGGGCGCGTCTTTATGCAAGTGGTGCCTGAAGACCATAATTAAGTGATTTTC
TAACGGAAAAAAAAACCCCGTGGAATGTTATTGATCCACTGTTTAATCCGAATGGGACTT
GGGAGGACTGAAGCTGAATGCTTCAAATTACCCATCTAGAATTGTTGCCCTGTCCTTGAA
ATTGTACAATTGAACGATGTACCTTTTTTTCAAGTTGAATTGGTCTTTACTACTATATCA
GAAACGGTACTAAAGTATTATCTCACAGAACACTGAATTGGAGGACAACGTTTGTTGTGC
GAGTCCTCGTGACTTTGTCCGAGTAGGTTGCTTTCCACTTCTCTTTTTGAACCAAGGATC
TATCGGAAACAACCTCTCTACCCCATGAAGGTTGGGGCAAGGCTTGTGTACTTGTTATCC
TCTCAAACCTCACTTGTGGGATTACATTGTAGAAACAATACGAACCTCAAAACTATAACT
ATTTCAGTCGAGGAAATAGGACAAATGAAGTTGTCTTTGGTAGGGAATAGTGAGGTGGTA
ACTATCTATTTGTCCTTTAACACGAGGTTTCGGGTTTAAAAAAAT
    3' downstream sequence 
    gggaatatagttttgtttgggtattactttcatagagttgtcagttttaa..........

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