Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: PGSC0003DMT400051801

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Description

GTP cyclohydrolase I [Source:PGSC_GENE;Acc:PGSC0003DMG400020105]

Location

Chromosome 6: 58,218,330-58,221,998 reverse strand.

About this transcript

This transcript has 2 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene PGSC0003DMG400020105 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400051801	1993	458aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BS83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400051802	2903	277aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BS84	-

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Exons

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Exons/ Introns

Translated sequence
Flanking sequence
Intron sequence
UTR

Markup

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No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........aaaacattttttaaatactgcaaagttcttgtagtaatgcatatgcatct
1	PGSC0003DMT400051801.exon1	58,221,998	58,221,569	-	1	430	CATCTCCAGATCCCTATAGTATATGTTCATCAATAGCAGCCCTACAAATCCCCTTTCATC CCTATTTTTGGTCAAATTTTCCTCATTTGGGTCATTGGGTGTCTCAAATTTGGAATCTTT GGCTAAAATCTTTCGAATTAAAGATTCAATTTTTGTTCTTGTTCTTGATTCATCACTTGT GATTCAGGTGGTAAGATCTGTTGTATTATTTCGTTTTGTGTGTCAATGGGCGCATTAGAT GAAGGGCATTATCATGCAGAAATAGATAACGAAGTTAGTTTTGAGCTTGGCTTTGAAAGT CAGCCTGAAACACTGGCTATTCAGGATGCTGTTAGAGTCCTATTGCAGGGTTTGGGTGAA GATATCAATAGGGAAGGAATCAAGAAAACCCCTTTTCGTGTTGCTAAGGCTCTTCGACAA GGAACAAGAG
	Intron 1-2	58,221,568	58,219,893			1,676	gtaaactttgacacccttttggatt..........ctttcatattttgtgttgtatgaag
2	PGSC0003DMT400051801.exon2	58,219,892	58,218,330	1	-	1,563	GTTACAAACAAAAAGTGAATGATATCGTTCATGGCGCGTTATTCCCTGAAGCTGGATTGG AAGGTGGAAGTGGTCAGGCTGGAGGAGTTGGTGGGCTTGTGATTGTTCGAGATCTTGATC TCTTTTCATACTGTGAGTCTTGCTTGCTTCCATTCCAGGTTAAGTGTCATGTAGGTTATG TCCCATCTGGAAAAAGGGTTGTAGGATTAAGCAAGCTTTCTCGGGTTGCTGATATTTTTG CAAAACGGCTCCAAAGTCCACAGCGCCTTGCGGATGAAGTTTGCACTGCTTTGCAGCATG GAATCAAGCCAACAGGTGTTGCTGTGGTTCTACAGTGTATGCATATTTGTTTTCCAAATT TTGAATCAGCATTTCTCGACTCGACTTCCCAAGGATGGGTAAAGATAACAGCTACCTCAG GTTCTGGTGTTTTTGAGGATGGAAATGCTGATGTTTGGACTGATTTTTGGAGTCTACTAA AATTCAGAGGTATAAGCATAGACAATGCTCATCGTAGATCCTCTAGCCAATCATGGTGCC CATCTCAATCTTGTGGCATGCTAGGACAAGCAAATTCAGCTATGACAAATGCAGTGAATT CAATACTTAAGTCTCTGGGCGAAGATCCATTGAGAGAAGAGCTTGTAGAAACCCCATCTA GGTTTGTGAAGTGGTTCATGAACTTTAGAAACTCTAATTTGGAGATGAAACTGAATGGCT TTGTTCGAAGTAGAATAGATACTCGAAGTCCTTCTGGTCAGGTTGGTAATTTTAATGATG GCATCTGCTCTGAGCTCAATTTGTCATTCTGGTCCCAGTGTGAACATCATCTACTCCCTT TTCAAGGTGTTGTGCACATTGGTTATCACTCTTCAGATGGAGTCAACCCGGTTGGAAGAC CTCTAGTGCTATCAGTAGTACATTTTTATGGCTTTAAACTCCAAGTACAGGAAAGGGTTA CCAGACAAATAGCTGAGACTGTTTCATCATTCTTAGGTGAAGACATTATCGTAGTTGTGG AAGCAAATCACACCTGTATGATATCTAGAGGAATCGAGAAATTTGGAAGCAACACAGCCA CATTTGCTGTGTTGGGTCGATTTTCCACTGACCCTGTTGCAAGAGCAAAATTTCTGCAGA GCCTCCCAGACTCTTGTTCTGCAGGAAGATGATGTCTTTTCTCAAAGGAAATATACAGGC TACAGCAAGCTAAGTACTTGTCCTACGGATTACTCAGGTAAAACTGAAGGTATTGAGAAG CAAACTCGCGCTGAATTCAAGAATGTAGGTTCTTTGCTTGGAGGTCCTGTTTTTACTTCT ATAGCATAGTGATAAATGAGGTTATGAAATTTTATCCATTTTTTTTCCATCCTTGTAATA TTTAGCATGAGCAAGGGACCATACCAGCAATATTTTTAAGTTGCCCTTGGTTTTTCATTT CTAATGCAGTTGCCATTGATTTAAGTGTCATACTTGGCACATTGTGCCTTATTATAGCAT ATACATATATGATGTTTTCCAATCTCTTCTGCAATATTAATGTTACTGAAGTCCTGGTTG AAT
	3' downstream sequence						ttatttcagtaccatgtgaatcagtgcttacacttgtcttccgaacctaa..........

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