We need your help! Has Ensembl saved you time or effort? Please take 15 minutes to fill in a survey and help EMBL-EBI make the case for why open data resources are critical to life science research.
https://www.surveymonkey.com/r/QGFMBH8?channel=[webpage]

Solanum tuberosum (SolTub_3.0)
Description

Ara4-interacting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003048]

Location
About this transcript

This transcript has 11 exons and is annotated with 28 domains and features.

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-PGSC0003DMT4000078812269599aa
 
Protein coding
M0ZTP0 Ensembl Canonical
-PGSC0003DMT4000078822372387aa
 
Protein coding
M0ZTP1 -
-PGSC0003DMT4000078802260596aa
 
Protein coding
M0ZTN9 -
Markup
  • loaded
Show/hide columns
  • No.
  • Exon / Intron
  • Start
  • End
  • Start Phase
  • End Phase
  • Length
  • Sequence
No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
5' upstream sequence
..........ctaatttctatttcaatccctctataattatattcctttctgctctttca
1PGSC0003DMT400007880.exon154,115,73354,115,528-0206
GTTTCCCCCAAATACTATCTATCTATTTTACTCTTTCACGTTTCCTTCACAAATCAGTTG
TTTACAAAGATCGGAGAATCTCTGTTTCTTCTGCAGAATTTTGGGGAATTTTTTGTGGAA
AAATGGCGAGACCTAATCAAGAAGAAATCGAGACATTCATGAGCATTACTGGTGTTTCTG
AAGCCACCGCTATTCAGAAACTTGAG                                  
 Intron 1-254,115,52754,112,6862,842
gtgattttttttaattttttttttt..........cttatcttacatgctgtgttgatag
2PGSC0003DMT400007880.exon254,112,68554,112,6240262
GAGCATGGCGGGAATCTGAATGAAGCTGTGAATGCACATTTCAACCAGGGGGACATCAAT
AG                                                          
 Intron 2-354,112,62354,112,462162
gttagtaatacatgtccttggtctc..........ttgctgattgtttctaattatgcag
3PGSC0003DMT400007880.exon354,112,46154,111,87320589
AGTACATCCAGCACCTGTTGCTGCTGCTCCACACGAGGATGATATGGAAATAGATGATCC
GATTACAGAGGAATTTCACAGACCTCCCTTTTCAGTTTTTTCCTCTTCTAGAAGTCCAAA
TGCTTTCTCCGTTCTTGATCCTAGTTTCACTCGAAGTGTGTTTGACACCAATCTTACAAG
CCGTGCTCCATTTGTTTCACATCCAAGACAAGTAAGAGAGATCCCTATTGAGGTGAAGGA
TGGGGATGGACAATCTGGTCATTCTAGAAATGCTCCTGTTATTGAGGATGTTACAGACGC
TGACCAGACCCAAGGCACAGAAACTCGTGGGACTGTCATAATTGATGAGGACGATGACGA
TGACGAAGTAGTTCCAGGTCCCCTGGCAACACGTGCTGCCAGGCGTGATAGAACAAATGA
TGATATCCTTGGCGGTGACTCTACAGCAGTATTCTCAGGACCAAGTGCTCCTGGTGGTGA
TGTCTTGCCAGACTATGCCAATGATATTGAGGAGGAAATGGTTCGTGCTGCAATTGAAGC
TTCCAGACGTGACGCTGAAATGTCGACCCAACAATTTGACGTCAACAGT           
 Intron 3-454,111,87254,111,79281
gtatgtagtgatattgctagttgtg..........ttgatattcctttgtcatgctacag
4PGSC0003DMT400007880.exon454,111,79154,111,7080084
GATCTAAGTGATCCAAGGCCTCAACCAAGGGAGTCTCATCTAGAGGATGCTCAACTTGCA
CATGCAGTCTCTTTGTCTTTGAAG                                    
 Intron 4-554,111,70754,111,63672
gtttcatttttactattgctatact..........tcatgctaacactgaggaaatttag
5PGSC0003DMT400007880.exon554,111,63554,111,52302113
GCTGCTGAGCAGGAGAAAGCGATGCATGAAGAAAGTAAAGCTATACCAGAATCAGAAGGT
TATAGGCCAGCTGAAGAGAATGAGCATGGAAAATCAACAATTTCAAATGGAAG       
 Intron 5-654,111,52254,111,327196
gtactggttattgtctgtaatattt..........tggattatctaactagtttccccag
6PGSC0003DMT400007881.exon654,111,32654,111,11620211
GCAATTTAGATCAGAGGTGGGGAGTTCATCCGTCCAAGATGAAGCTGAAGATTTAGAAGA
GGAACCACTGGTTTGGCGCAGAAGAAAACCTATATCTTCAGGTTCTGAAACAGCTCAGGA
TGTCGAAGAACGTGTTGTTAGCCCATTATCAAGTCCTCGACAGAATCTTAATCACTCCCC
AAGAAACGGTGCTGACTTCCAGTCTGATGAG                             
 Intron 6-754,111,11554,111,013103
gtatttttttcgctgttttagtggt..........gtacttccatatgatttccttgaag
7PGSC0003DMT400007880.exon754,111,01254,110,79700216
TGGGGTGGCATGTCATCCCTGGAGCATGATGAAGCTGTCATGCTTGAAGCTGCAATATTT
GGCGGAATACCTGAGGGTACCGGGTATCGTTTGCCATCTGCACCTCATCAGCCTATTCAG
AATGGTGCTGATGGACCTATGGGCCCCTATCAATGGCGCATGCCTCGTGCCCCATCTCCG
TCTCTTGTGGCACAGCGTTTACTTCGAGAACAGCAG                        
 Intron 7-854,110,79654,110,72176
gttagcattttaagccctcagctgc..........attctgcttctaatattgtacgtag
8PGSC0003DMT400007880.exon854,110,72054,110,58900132
GATGATGAATATCATGCTGCATTGCAAGCTGATAGAGAAAAGGAATTGAAGGCCAAGCAA
GAAGCTGAAGCTGCACTTGAAGAGAAGAGACTGGAGGAGGAGGAATTACGAAGGAAAGCA
GAGGAGGAAAAG                                                
 Intron 8-954,110,58854,110,190399
gtataaagcaccatatctctggcct..........aatccctgactcagttattgatcag
9PGSC0003DMT400007880.exon954,110,18954,110,04600144
GAAATGGAGAGACAATTAGAAGCAAAAGAAGCTTCTCTTCCTCAGGAGCCCAAAGCAGAT
AACGAGAATGCTGTGAATCTTGTTGTGCGTATGCCTGATGGCAGCCGCAGAGGCCGACGC
TTTCTCAAATCTGATAGATTACAG                                    
 Intron 9-1054,110,04554,109,95987
gtatattggtgttcaggtgacatga..........aactggatcaacatgtgctttgcag
10PGSC0003DMT400007880.exon1054,109,95854,109,9020057
TGTCTTTTCGATTACATTGATGTTGGCAGAGTGATCATGCCCGGCACATATAGATTG   
 Intron 10-1154,109,90154,109,397505
gtaactctctttaacttgagagtgg..........ctaattcaatgtctactacatgcag
11PGSC0003DMT400007880.exon1154,109,39654,108,9420-455
GTAAGACCTTATCCAAGGCGTGCTTTCAGTGATGGAGAGAGTACCCTGTCTCTGGACGAA
CTGGGGTTGAACAGCAAACAAGAAGCCTTGTTTCTGGAGTCGATATAAGTCATTCACGTT
GTAAAGTAGTTTCAGATCTCTTCCCAAAAAAATAGATTTATACATACATACATACGTGAA
AATGGTGTTCATGGGTTGGTTTGTTTTGGTTGTTTAACATCGCTGCATATTTATCTGGTT
GCTAGGGAGAACGCCATTGATGATCATGGTTAGTCGGGAGTATTCTAATGATTTATGGTG
CTTTATATGTGGAATTAAATCATTTGCTTTTTGAAAATCGACAAAAATAGTATAAAGTTT
GTCAAATGGTTATGTGACATAAGCTGGAACTTAATGAGCATTATGGACCAGCTTTTGAGA
AATACGAGCATACTACTTCTGGGTTCATTTTAATT                         
3' downstream sequence
gtcatgttttaatttttcacacgtccctcaactaaaatgattattttact..........