Solanum tuberosum (SolTub_3.0)
Description

PHD finger family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402022202]

Location
About this transcript

This transcript has 7 exons and is annotated with 17 domains and features.

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-PGSC0003DMT4000571553055823aa
 
Protein coding
M1C0J1 Ensembl Canonical
-PGSC0003DMT4000571543070527aa
 
Protein coding
M1C0J0 -

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
PANTHER7527-PTHR47527-
CDD398526-cd04370-
PROSITE profiles399526Bromo adjacent homology (BAH) domainPS51038IPR001025 [Display all genes with this domain]
SMART399526Bromo adjacent homology (BAH) domainSM00439IPR001025 [Display all genes with this domain]
Pfam414525Bromo adjacent homology (BAH) domainPF01426IPR001025 [Display all genes with this domain]
Gene3D378526Bromo adjacent homology (BAH) domain superfamily2.30.30.490IPR043151 [Display all genes with this domain]
Superfamily69133Zinc finger, FYVE/PHD-typeSSF57903IPR011011 [Display all genes with this domain]
PROSITE profiles74126Zinc finger, PHD-fingerPS50016IPR019787 [Display all genes with this domain]
Pfam77123Zinc finger, PHD-fingerPF00628IPR019787 [Display all genes with this domain]
SMART76124Zinc finger, PHD-typeSM00249IPR001965 [Display all genes with this domain]
PROSITE patterns77123Zinc finger, PHD-type, conserved sitePS01359IPR019786 [Display all genes with this domain]
Gene3D66144Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite133
MobiDBLite136
MobiDBLite327347
Seg247258
Alphafold1527