Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: PGSC0003DMT400081775

Description

CDC48-interacting UBX-domain protein [Source:PGSC_GENE;Acc:PGSC0003DMG400032118]

Location

About this transcript

This transcript has 3 exons and is annotated with 17 domains and features.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400081775	1837	456aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1D518	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Domains & features

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
PANTHER	1	451	-	PTHR47694	-
CDD	163	251	-	cd09212	-
Gene3D	164	251	-	1.20.58.2190	-
SMART	169	236	-	SM00580	-
Gene3D	334	427	-	3.10.20.90	-
Pfam	169	244	PUB domain	PF09409	IPR018997 [Display all genes with this domain]
Superfamily	166	230	PUB-like domain superfamily	SSF143503	IPR036339 [Display all genes with this domain]
Pfam	340	390	UBX domain	PF00789	IPR001012 [Display all genes with this domain]
PROSITE profiles	340	424	UBX domain	PS50033	IPR001012 [Display all genes with this domain]
Superfamily	311	424	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

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