Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
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External References
- General identifiers
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Supporting evidence
ID History
- Transcript history
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Transcript: PGSC0003DMT400052251

Description

Plant UBX domain-containing protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400020270]

Location

About this transcript

This transcript has 7 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400052251	1093	251aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BT31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Domains & features

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	40	177	-	3.10.20.90	-
CDD	107	179	-	cd16118	-
PANTHER	1	251	Plant UBX domain-containing protein 1	PTHR47557	IPR044232 [Display all genes with this domain]
PROSITE profiles	102	178	UBX domain	PS50033	IPR001012 [Display all genes with this domain]
Superfamily	82	178	Ubiquitin-like domain superfamily	SSF54236	IPR029071 [Display all genes with this domain]

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