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    Transcript: PGSC0003DMT400030158

    Description

    WD-repeat protein [Source:PGSC_GENE;Acc:PGSC0003DMG400011544]

    Location

    Chromosome 12: 56,221,757-56,228,576 forward strand.

    About this transcript

    This transcript has 9 exons and is annotated with 32 domains and features.

    Gene

    This transcript is a product of gene PGSC0003DMG400011544 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -PGSC0003DMT4000301581956453aa
     
    Protein coding
    		M1ATT5 Ensembl Canonical
    -PGSC0003DMT4000301601470310aa
     
    Protein coding
    		M1ATT7 -
    -PGSC0003DMT40003015953958aa
     
    Protein coding
    		M1ATT6 -

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    PROSITE profiles99135-PS50294-
    PROSITE profiles186221-PS50294-
    PROSITE profiles308344-PS50294-
    PROSITE profiles395427-PS50294-
    PANTHER1453DNA excision repair protein Rad28/ERCC8/Ckn1/ATCSA-1PTHR46202IPR042238 [Display all genes with this domain]
    Prints119133G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints206220G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    Prints327341G-protein beta WD-40 repeatPR00320IPR020472 [Display all genes with this domain]
    SMART3272WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles3981WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART90132WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles99141WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam100132WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART179219WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam183219WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles186228WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    SMART301340WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    PROSITE profiles308349WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    Pfam309340WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    SMART388427WD40 repeatSM00320IPR001680 [Display all genes with this domain]
    Pfam390427WD40 repeatPF00400IPR001680 [Display all genes with this domain]
    PROSITE profiles395427WD40 repeatPS50082IPR001680 [Display all genes with this domain]
    PROSITE patterns206220WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    PROSITE patterns327341WD40 repeat, conserved sitePS00678IPR019775 [Display all genes with this domain]
    Superfamily38429WD40-repeat-containing domain superfamilySSF50978IPR036322 [Display all genes with this domain]
    Gene3D2264WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]
    Gene3D286430WD40/YVTN repeat-like-containing domain superfamily2.130.10.10IPR015943 [Display all genes with this domain]

    Other features

    Show/hide columns
    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    MobiDBLite239270
    MobiDBLite239277
    Seg5873
    Seg430441
    Alphafold1453

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