Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: PGSC0003DMT400019541

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Description

AMSH-like ubiquitin thiolesterase 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400007555]

Location

Chromosome 1: 44,382,274-44,387,896 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene PGSC0003DMG400007555 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400019542	1985	504aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AC81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400019541	950	229aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AC80	-

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	110	-	1.20.58.80	-
PANTHER	1	220	-	PTHR12947	-
Pfam	3	93	USP8 dimerisation domain	PF08969	IPR015063 [Display all genes with this domain]

Other features

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Feature type
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Feature type	Start	End
Alphafold	1	229

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