Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: PGSC0003DMT400016325

.

Description

Ufm1-conjugating enzyme [Source:PGSC_GENE;Acc:PGSC0003DMG400006380]

Location

Chromosome 4: 65,757,608-65,759,482 reverse strand.

About this transcript

This transcript has 3 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene PGSC0003DMG400006380 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400016325	982	174aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1A7G9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	170	Ubiquitin-conjugating enzyme/RWD-like	3.10.110.10	IPR016135 [Display all genes with this domain]
Superfamily	6	164	Ubiquitin-conjugating enzyme/RWD-like	SSF54495	IPR016135 [Display all genes with this domain]
PIRSF	3	168	Ubiquitin-fold modifier-conjugating enzyme 1	PIRSF008716	IPR014806 [Display all genes with this domain]
PANTHER	5	171	Ubiquitin-fold modifier-conjugating enzyme 1	PTHR12921	IPR014806 [Display all genes with this domain]
Pfam	8	163	Ubiquitin-fold modifier-conjugating enzyme 1	PF08694	IPR014806 [Display all genes with this domain]

Other features

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
Alphafold	1	174
Alphafold	1	174
Alphafold	1	174

.

Personal Data