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Solanum tuberosum (SolTub_3.0)
Description

Ara4-interacting protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003048]

Location
About this transcript

This transcript has 11 exons and is annotated with 28 domains and features.

Show/hide columns (1 hidden)
  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • Flags
NameTranscript IDbpProteinBiotypeUniProtFlags
-PGSC0003DMT4000078812269599aa
 
Protein coding
M0ZTP0 Ensembl Canonical
-PGSC0003DMT4000078822372387aa
 
Protein coding
M0ZTP1 -
-PGSC0003DMT4000078802260596aa
 
Protein coding
M0ZTN9 -

Domains

Show/hide columns
  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Gene3D145-1.10.8.10-
CDD642-cd14351-
Pfam646-PF14555-
Gene3D515595-3.10.20.90-
CDD520594-cd01767-
Superfamily244UBA-like superfamilySSF46934IPR009060 [Display all genes with this domain]
SMART511595UBX domainSM00166IPR001012 [Display all genes with this domain]
PROSITE profiles514592UBX domainPS50033IPR001012 [Display all genes with this domain]
Pfam515594UBX domainPF00789IPR001012 [Display all genes with this domain]
PANTHER10594UBX domain-containing proteinPTHR23322IPR050730 [Display all genes with this domain]
Superfamily478594Ubiquitin-like domain superfamilySSF54236IPR029071 [Display all genes with this domain]

Other features

Show/hide columns
  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite180212
MobiDBLite226381
MobiDBLite236247
MobiDBLite248263
MobiDBLite275304
MobiDBLite305320
MobiDBLite321330
MobiDBLite356368
MobiDBLite469504
MobiDBLite469511
Seg5060
Seg7792
Seg161173
Seg178190
Seg462504
Alphafold1596
Ncoils455506