Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Transcript: PGSC0003DMT400001170

.

Description

Ring zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000440]

Location

Chromosome 11: 38,605,672-38,606,842 reverse strand.

About this transcript

This transcript has 1 exon and is annotated with 7 domains and features.

Gene

This transcript is a product of gene PGSC0003DMG400000440 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400001171	1970	446aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZI10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400001172	1299	214aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZI11	-
-	PGSC0003DMT400001170	1171	134aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZI09	-

.

Domains & features

.

Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Superfamily	5	64	-	SSF57850	-
PROSITE profiles	9	58	Zinc finger, RING-type	PS50089	IPR001841 [Display all genes with this domain]
PROSITE patterns	24	33	Zinc finger, RING-type, conserved site	PS00518	IPR017907 [Display all genes with this domain]
Gene3D	1	105	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

Show/hide columns

Feature type
Start
End

Download what you see Download whole table

Filter

Feature type	Start	End
MobiDBLite	72	92
MobiDBLite	72	99
Alphafold	1	134

.

Personal Data