Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400029944

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Description

Histone deacetylase [Source:PGSC_GENE;Acc:PGSC0003DMG400029944]

Location

Chromosome 8: 36,174,472-36,182,020 forward strand.

About this gene

This gene has 7 transcripts (splice variants), 171 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	PGSC0003DMT400076991	1894	354aa	PGSC0003DMT400076991	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CXR3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400076986	4483	236aa	PGSC0003DMT400076986	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CXQ8	-	-
-	PGSC0003DMT400076989	2658	142aa	PGSC0003DMT400076989	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CXR1	-	-
-	PGSC0003DMT400076987	2657	147aa	PGSC0003DMT400076987	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CXQ9	-	-
-	PGSC0003DMT400076990	1903	236aa	PGSC0003DMT400076990	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CXQ8	-	-
-	PGSC0003DMT400076988	1790	98aa	PGSC0003DMT400076988	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CXR0	-	-
-	PGSC0003DMT400076992	1039	68aa	PGSC0003DMT400076992	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CXR4	-	-

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Summary

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