Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400004887

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Description

PHD1 [Source:PGSC_GENE;Acc:PGSC0003DMG400004887]

Location

Chromosome 6: 48,587,503-48,593,397 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 180 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400012523	1310	257aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1A1C6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400012525	1641	182aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1A1C8	-
-	PGSC0003DMT400012524	1307	256aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1A1C7	-

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Summary

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Gene type

Protein coding

Annotation method

Gene annotation by The Potato Genome Sequencing Consortium (PGSC)

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