Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: PGSC0003DMG400029168

.

Description

Ubiquitin-protein ligase [Source:PGSC_GENE;Acc:PGSC0003DMG400029168]

Location

Chromosome 6: 5,784,054-5,793,112 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 126 orthologues and 61 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	PGSC0003DMT400074998	1555	346aa	PGSC0003DMT400074998	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CUH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400074999	2755	152aa	PGSC0003DMT400074999	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CUH5	-
-	PGSC0003DMT400075001	1578	91aa	PGSC0003DMT400075001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CUH6	-
-	PGSC0003DMT400074997	1500	250aa	PGSC0003DMT400074997	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CUH2	-
-	PGSC0003DMT400074996	1129	144aa	PGSC0003DMT400074996	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CUH1	-
-	PGSC0003DMT400075000	971	152aa	PGSC0003DMT400075000	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CUH5	-

.

Summary

.

.