Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400028224

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Description

Carotenoid isomerase, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400028224]

Location

Chromosome 10: 56,306,412-56,312,609 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 157 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	PGSC0003DMT400072543	2643	615aa	PGSC0003DMT400072543	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CQH9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400072541	2791	524aa	PGSC0003DMT400072541	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CQH7	-	-
-	PGSC0003DMT400072542	2626	308aa	PGSC0003DMT400072542	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CQH8	-	-
-	PGSC0003DMT400072540	640	77aa	PGSC0003DMT400072540	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CQH6	-	-

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Summary

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