Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400027195

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Description

Speckle-type POZ protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027195]

Location

Chromosome 5: 48,247,456-48,252,669 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 149 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	PGSC0003DMT400069942	1666	408aa	PGSC0003DMT400069942	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CLF5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400069945	1890	340aa	PGSC0003DMT400069945	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CLF8	-
-	PGSC0003DMT400069943	1706	340aa	PGSC0003DMT400069943	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CLF8	-
-	PGSC0003DMT400069944	1692	340aa	PGSC0003DMT400069944	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CLF8	-
-	PGSC0003DMT400069941	676	71aa	PGSC0003DMT400069941	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CLF4	-

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Summary

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