Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400021551

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Description

Protein kinase APK1A, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400021551]

Location

Chromosome 9: 5,427,150-5,434,231 reverse strand.

About this gene

This gene has 9 transcripts (splice variants), 201 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	PGSC0003DMT400055495	2355	423aa	PGSC0003DMT400055495	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY11	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400055493	2375	170aa	PGSC0003DMT400055493	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY07	-	-
-	PGSC0003DMT400055494	2335	423aa	PGSC0003DMT400055494	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY11	-	-
-	PGSC0003DMT400055497	2315	423aa	PGSC0003DMT400055497	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY11	-	-
-	PGSC0003DMT400055496	2222	423aa	PGSC0003DMT400055496	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY11	-	-
-	PGSC0003DMT400055499	1574	187aa	PGSC0003DMT400055499	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY13	-	-
-	PGSC0003DMT400055491	1416	270aa	PGSC0003DMT400055491	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY05	-	-
-	PGSC0003DMT400055492	1416	270aa	PGSC0003DMT400055492	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY05	-	-
-	PGSC0003DMT400055498	1347	100aa	PGSC0003DMT400055498	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1BY12	-	-

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Summary

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