Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400011399

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Description

Ubiquitin-protein ligase [Source:PGSC_GENE;Acc:PGSC0003DMG400011399]

Location

Chromosome 9: 52,575,368-52,580,483 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 218 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	PGSC0003DMT400029648	1904	333aa	PGSC0003DMT400029648	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AT69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400029651	1349	244aa	PGSC0003DMT400029651	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AT71	-
-	PGSC0003DMT400029649	958	102aa	PGSC0003DMT400029649	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AT70	-
-	PGSC0003DMT400029646	677	50aa	PGSC0003DMT400029646	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AT68	-

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Summary

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