Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400000194

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Description

Potyviral helper component protease-interacting protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400000194]

Location

Chromosome 1: 72,677,929-72,686,075 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 135 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	PGSC0003DMT400000554	1905	634aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZGX6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400000556	2239	319aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZGX7	-	-
-	PGSC0003DMT400000555	1567	319aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZGX7	-	-

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Summary

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Gene type

Protein coding

Annotation method

Gene annotation by The Potato Genome Sequencing Consortium (PGSC)

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