Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400009473

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Description

CAK associated cyclinH homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400009473]

Location

Chromosome 4: 62,730,105-62,736,557 forward strand.

About this gene

This gene has 8 transcripts (splice variants), 162 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	PGSC0003DMT400024500	1707	327aa	PGSC0003DMT400024500	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400024497	1993	267aa	PGSC0003DMT400024497	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK82	-
-	PGSC0003DMT400024498	1676	327aa	PGSC0003DMT400024498	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK84	-
-	PGSC0003DMT400024499	1667	327aa	PGSC0003DMT400024499	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK84	-
-	PGSC0003DMT400024496	1242	214aa	PGSC0003DMT400024496	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK81	-
-	PGSC0003DMT400024501	1178	64aa	PGSC0003DMT400024501	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK86	-
-	PGSC0003DMT400024502	1100	87aa	PGSC0003DMT400024502	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK87	-
-	PGSC0003DMT400024495	633	210aa	PGSC0003DMT400024495	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1AK80	-

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Summary

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