Gene: PGSC0003DMG400023752

Description

Acidic ribosomal protein P1a [Source:PGSC_GENE;Acc:PGSC0003DMG400023752]

Location

Chromosome 1: 80,992,281-80,993,236 reverse strand.

About this gene

This gene has 2 transcripts (splice variants), 226 orthologues and 13 paralogues.

Transcripts

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Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400061042	765	112aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1C6Y7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400061041	664	112aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1C6Y7	-

Marked-up sequence

Download sequence BLAST this sequence

Exons

PGSC0003DMG400023752 exons
All exons in this region

Variants

Markup

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>chromosome:SolTub_3.0:1:80991681:80993836:-1
AACATTGATTTTCGATACTCCATTGATAATATTCAATCTATGCCAAATTGAAGTCGATTG
ATTTGAGATTATTGCGGCTAGTGAAGAAGATTTTAGAATGAATGCAAAATAAAAATTAAA
TACAAAACTTGTTGGCATACAAAGTGAAATTGAAATAAAAAGTGAGATTGAAATACAAAG
TGAGCGCAAATAAATCTTGTTGGCATACATTTAGAATGAATACAAAAAAAAAAAAAAAAA
TACAAAACTTGTTGGCATACCTTCGGTCTTTAGAATGAATACAAAATAAAAAAGAAATAC
AAAACTTGTTGACTTACAAAGTTAGATTGAAACACAAAGTGATATTGAAATACAAAATGA
GCACAAAAAATACAAAACTTGTTGGCAATATAATTATAATGAATGTAAAATAAAAAAGAA
ATACAAAATTGTTGGCATATAAAACGGGTTGCTATATATCTCATTGAAATATCAAGTAAT
CTTACAGGGCTAATAGGCCCAATGTTTATTGGGCTTCATTTTTCAATATTGGGCCCCCAA
AACCCTGCTAACGCTGTGTTTCTCCACTTTATAAACCTCTCATCATCTCAAAACCCTAGC
AGCAAGAACTCAGTAACAGCAGCCCGAAGAAGCAGACCGCCATTTTCTTGTCCTTTAAGG
TACAAACCCTAACCAATTCCTCTGCAGTATCACAAGTTCATCTATATATGAATTAGGCAT
TTTCTCCGTAGGAGTTTCAATATTGGTGAAAAAATTGCAGGAACAGGTAATTCGTTTGAG
TAGAAAATGTCGATCGGAGAAATTGCTAGTACCTACGCTTGTTTGATCCTTCACGACGAT
GACATCGCCATCACAGTTAGTTTCTTTGCCTGATAAGTTTTATCCGGATCTGTTTTTATC
GTTTTGTGAAGTATTCATTTTGGTTTGTTTTGATTGTAATAGGCAGAGAAGATTTCTGCT
CTTGTAAAAGCAGCAAATCTCACAATCGAGCCTTACTGGCCTCTCTTGTTCGCCAAGCTT
GCCGAGAAGAAAAACATCTCAGATCTCATCATGAACGTTGGTGCCGGCGGTGGTGGTGTC
GCTGCCGTTGCTGCCCCCGTCGGTGGTGCCGCCGCTGGTGGTGGTGCAGCAGCTGCCCCT
GCTGCTGAAGTGAAGAAGGTAATGAACTATTTCATCTTTCTTTTTTTTCAGAATTCGTTT
AACCACGAGTTGCATATATTTATAATTAACTGAGTGTTAATTTTTGTTTTATGTGTGTAC
AGGAGGAACCAAAGGAAGAAAGTGATGACGATATGGGATTCAGTTTGTTCGATTAGAAAG
CTACCGTTAGTATGATCTGTTCTTTTGTTTCCAAAAAATATTGGTTAAAGTTTTAGTTTT
GATGTTTGAGATATTTGGAAAGTTTAAGAGTAACATTTAATCATCAGGAGGTTATGTACT
CTTGTTATGCTAGTTTTGTGCCTTAGTTTGAGCCATTTTTGTCAGTTTAATCAAATGTTT
GCCCCTCTATTGTTAAAATTTAATTCTCTGTTTTGTTATATTGTCACGGATCTTTTACTT
ATTAAGTCTTACTTAACAAACAATAGAATGCTCTTAGTAACCACGAAACATTCCATGCTA
TTTTAGAGTCCCTGTCTTGACAATTTGCAATGTAAGGCTATGCTACTGTAGTTTTGATTT
TGAGACAATTGGTGATGCAGCTTAACTGCCTGAATGGATCTTGATTTGGAAATGTCTTCC
ATATTTACATGATATGCATTTGAGCTGAGCTGTCTTCTTTCTATTCTTGATAAATTGTTC
AGTAGATACCAGTTACAAACTACGTAGGATAAATTGTTCAGTAGATACCAGTTGCAAACG
ACGTAGGATAAGTTGTTTTAGGTAGTAGTCATTTGCAACTGGTGTTGATGAGATATGTTT
TCTATGGAGTTCTTTGGCGGCAATCTACTGGCAGCTTTAGAATGTTGAATAATTATCTGT
CCTTAGATTAATGTAAGTTGGATGCTAGTCTTTTGATATTTTCTTGGTCCTTAGGCCTAC
TACTCTACTGCCCTTCCTCTGTTCATTTTAGTATACATCAAAGTGGAGAAACTTGGTTTT
ATCTACTCCCAAGCAAATGGCCGATTTGAGCCAAGAACCAGCTTCAGCATGATGTA

Gene: PGSC0003DMG400023752

Marked-up sequence

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Gene: PGSC0003DMG400023752

Marked-up sequence

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