Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
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Ontologies
- GO: Anatomical entity
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ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400003404

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Description

RING finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003404]

Location

Chromosome 6: 2,268,577-2,272,876 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 132 orthologues and 1 paralogue.

Transcripts

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Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400008764	2399	215aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZV17	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400008763	1114	215aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZV17	-
-	PGSC0003DMT400008762	1101	215aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZV17	-
-	PGSC0003DMT400008761	477	158aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M0ZV16	-

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External references

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This gene corresponds to the following database identifiers:

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External database	Database identifier
Expression Atlas	PGSC0003DMG400003404 [view all locations]
NCBI gene (formerly Entrezgene)	LOC102601266 E3 ubiquitin-protein ligase RNF4-like [view all locations]
PGSC	PGSC0003DMG400003404 RING finger protein [view all locations]
UniProtKB Gene Name	102601266 [view all locations] 102601266 [view all locations]
WikiGene	LOC102601266 E3 ubiquitin-protein ligase RNF4-like [view all locations]

The following database identifiers correspond to the transcripts of this gene:

Transcript ID
PGSC0003DMT400008762
PGSC0003DMT400008763
PGSC0003DMT400008761
PGSC0003DMT400008764

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