Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400015319

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Description

Ubiquitin ligase protein cop1 [Source:PGSC_GENE;Acc:PGSC0003DMG400015319]

Location

Chromosome 12: 597,737-607,412 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues and 32 paralogues.

Transcripts

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Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	PGSC0003DMT400039600	4569	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1B8I4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400039602	4699	702aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1B8I6	-	-
-	PGSC0003DMT400039601	4615	717aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1B8I5	-	-

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Supporting evidence

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Transcript
CDS support
UTR support
Exon supporting features

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Transcript	CDS support	UTR support	Exon supporting features
PGSC0003DMT400039600
PGSC0003DMT400039601
PGSC0003DMT400039602

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