Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400013890

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Description

Zinc metalloproteinase [Source:PGSC_GENE;Acc:PGSC0003DMG400013890]

Location

Chromosome 12: 6,402,906-6,409,551 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 142 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	PGSC0003DMT400036067	2320	634aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1B380	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400036066	3292	396aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1B379	-
-	PGSC0003DMT400036068	2959	82aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1B381	-
-	PGSC0003DMT400036069	2792	350aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1B382	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data