Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PGSC0003DMG400026857

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Description

Splicing factor 3B subunit [Source:PGSC_GENE;Acc:PGSC0003DMG400026857]

Location

Chromosome 3: 2,013,850-2,021,171 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 217 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	PGSC0003DMT400069042	2303	584aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CJU7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	PGSC0003DMT400069041	2337	317aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CJU6	-	-
-	PGSC0003DMT400069039	1692	563aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1CJU5	-	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data