Solanum lycopersicum (SL3.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 2: 46,097,634-46,099,001 forward strand.
This transcript has 1 exon, is annotated with 13 domains and features, is associated with 1381 variant alleles and maps to 25 oligo probes.
This transcript is a product of gene Solyc02g081670.1 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Gene3D | 45 | 89 | - | 1.20.1280.50 | - |
| CDD | 50 | 84 | - | cd09917 | - |
| Pfam | 139 | 345 | Domain unknown function DUF295 | PF03478 | IPR005174 [Display all genes with this domain] |
| PROSITE profiles | 46 | 95 | F-box domain | PS50181 | IPR001810 [Display all genes with this domain] |
| Pfam | 49 | 88 | F-box domain | PF00646 | IPR001810 [Display all genes with this domain] |
| SMART | 52 | 92 | F-box domain | SM00256 | IPR001810 [Display all genes with this domain] |
| Superfamily | 40 | 104 | F-box-like domain superfamily | SSF81383 | IPR036047 [Display all genes with this domain] |
| Superfamily | 95 | 401 | Galactose oxidase/kelch, beta-propeller | SSF50965 | IPR011043 [Display all genes with this domain] |
| Gene3D | 111 | 404 | Kelch-type beta propeller | 2.120.10.80 | IPR015915 [Display all genes with this domain] |
| PANTHER | 47 | 403 | SCF complex F-box component | PTHR31672 | IPR050796 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Seg | 187 | 198 |
| Seg | 418 | 431 |
| Alphafold | 1 | 455 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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