Gene: Solyc04g054370.1

Location

Chromosome 4: 52,306,068-52,306,565 reverse strand.

About this gene

This gene has 1 transcript (splice variant), 73 orthologues and 1 paralogue.

Transcripts

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Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Solyc04g054370.1.1	498	165aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q7G5T7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Marked-up sequence

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Exons

Solyc04g054370.1 exons
All exons in this region

Variants

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>chromosome:SL3.0:4:52305468:52307165:-1
GGTTAAAAAAACATATTATTAGCTAACAAAATTATAGTTTATTTAATTACCACTCGCACT
CTCTTTTTAGCTATATTATGTGGTCACTCTTTTCTCTTATACATATGCAAATACATAATA
TGATACATATGCAAATATAATTTGTCTCTCTCCTTTCTTTGTCCTCTCTCCTCTCTTTTC
AATCTTGCTCGCCAAATATACAAATACATATATATTGTTAACCACATATATAGATATTCA
ATTCAACAAATATATAGATGCACAATTCAATTCTCTCCACTCTCTGTCCTTTAATTTCTC
GCTCGCTCCTCTCACGATTTCTCTCTCTTATCTCTAACACGTAACTATGAATCGTAATTA
GCAAATCACAAGTATAGGATCTAATTAAGTTATTTTTAAAAGCCGTTTGGGAAAGGCAAT
TATTTTTATGACCAATCAGATCCTTGCCCTTGAAATGTCTTCATATATAGATATATATAT
ATATATATATATTAGAGTAAAAGCAAATTGCACCCGGGTGCAAACCTAAATGTACCAAAA
AAGAAGAAACTTCTCTTTCTTTGTATACACATCATAATCATATATACAATAACAACAATT
ATGGCTGCTCTTTCTCAGCTCTTAGCTCATATCTACACCATGACTCTAGTCTTCGTCACC
ATTCTCATACTCGAACTCGTAATCTTAGTACGTTCCATAACCGACACAATCTCAGATTCC
GGCCGCGGCCGCCCCATCACAACCAAGCAATACCTCAAACTCATCGACGAAAAAAACCCG
GTCAGCCGGTTCAAAACCCCCTCAATCAACCCGGCCGGTTTTTCCGATACCTGTGCCGTT
TGTTTATCGGCATTTGAAGACGGCGAACAAGTACGGAAGCTGAAATGCAAGCATATTTTT
CACAAGGATTGTTTGGACACGTGGCTCCAACAAGATTCTGCCACGTGTCCGCTCTGCCGG
AATAAGGTGCTGCCGGAAGAAATTGTGGTTAAATTCCGGCAGCACCGTAACCTGCAGACG
GAGTATGAAGGAAGTGATGAGGAGCTCATTTTTTTGTTATCTGCATTACATGGTAATTAT
ATTGGTAGATTTTTGTAAACTTTTTTTTTTTAATTTTTGTATATAAAAAGATTTAGAATA
TTAAAAAAGGAAAATAATTGAGTGTGCTTCATATACTTGGGGCTTTCTGATTGGTTAATT
GTGTGCCAGAGAGATATTTTATTCTACTTGAGTGTCGGTAATATTAACTAAAAATCGTAA
ATAATTTTTTTTTTTTTAAAAAAAGATAGTGTTGATAATATTGTATTGATTTTTTGATAA
CATTATCTGGCAAGTGTTGAAAAATTGTTGGTCATGCTCAGAATAGTGGTGGCCTACAAA
AAGTTTGGCATGGAGTAATTGATTTAATTAATTTAAAAGAGTGGTAGGTGAAATGCTTGA
AATTATTATGAATTGATAGCTCTAAAAACATACTTTGATGATATTGCAAAAAAAAAAGTT
GAAAAAGTAAAAATGTCTTTAAATTATGGAATAAAAAATCCGTTAAAATTTTCAAAATCG
CTTTTGTTGATAATATTTTGAACAAAAATGCTCATATGGTTAAATTTGGTTCAAAAACGT
ATTTTTCTTAATGAACATATTATATTTTTCTAAAACACATTAACTTGCTAATGAAACATT
ATTTTTAAAGATTTTTTT

Gene: Solyc04g054370.1

Marked-up sequence

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Gene: Solyc04g054370.1

Marked-up sequence

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