Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EFJ24643 UBC5-2-201

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Location

SuperContig GL377589: 859,508-860,443 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene SELMODRAFT_450660 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
UBC5-2-201	EFJ24643	636	183aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D8RT96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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General identifiers

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This transcript corresponds to the following database identifiers:

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External database	Database identifier
European Nucleotide Archive	GL377589 [align] [view all locations]
INSDC protein ID	EFJ24643.1 [align] [view all locations]
RefSeq DNA predicted	XM_002974375.1 [Target %id: 100; Query %id: 100] [align] ubiquitin-conjugating enzyme 5, E2 (UBC5-2), mRNA [view all locations]
RefSeq mRNA predicted	XM_002974375.2 [Target %id: 100; Query %id: 94] [align] PREDICTED: Selaginella moellendorffii ubiquitin-conjugating enzyme E2 5 (LOC9658363), transcript variant X2, mRNA. [view all locations] XM_024679297.1 [Target %id: 99; Query %id: 94] [align] PREDICTED: Selaginella moellendorffii ubiquitin-conjugating enzyme E2 5 (LOC9658363), transcript variant X3, mRNA. [view all locations] XM_024679298.1 [Target %id: 98; Query %id: 91] [align] PREDICTED: Selaginella moellendorffii ubiquitin-conjugating enzyme E2 5 (LOC9658363), transcript variant X4, mRNA. [view all locations] XM_024679300.1 [Target %id: 96; Query %id: 93] [align] PREDICTED: Selaginella moellendorffii ubiquitin-conjugating enzyme E2 5 (LOC9658363), transcript variant X5, mRNA. [view all locations]
RefSeq peptide predicted	XP_002974421.1 [Target %id: 100; Query %id: 100] [align] ubiquitin-conjugating enzyme 5, E2 [view all locations]
UniParc	UPI0001E025F1 [view all locations]
UniProt transcript name	UBC5-2-201 [align] [view all locations]
UniProtKB/TrEMBL	D8RT96.70 [Target %id: 100; Query %id: 100] [align] E2 ubiquitin-conjugating enzyme [view all locations]

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