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    Selaginella moellendorffii (v1.0) ▼

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    Transcript: EFJ17332

    Location

    SuperContig GL377614: 879,680-882,912 forward strand.

    About this transcript

    This transcript has 6 exons and is annotated with 19 domains and features.

    Gene

    This transcript is a product of gene SELMODRAFT_444910 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
    Download what you seeDownload whole table
    NameTranscript IDbpProteinBiotypeUniProtFlags
    -EFJ173322238745aa
     
    Protein coding
    		D8SDZ1 Ensembl Canonical

    Exons

    Download sequence
    Exons/ Introns
    • Translated sequence
    • Flanking sequence
    • Intron sequence
    Markup
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    • No.
    • Exon / Intron
    • Start
    • End
    • Start Phase
    • End Phase
    • Length
    • Sequence
    Download what you seeDownload whole table
    No.Exon / IntronStartEndStart PhaseEnd PhaseLengthSequence
    5' upstream sequence 
    ..........atcgatttaaagtattcgccgaatattttcctaggttagggctggtggcg
    1EFJ17332.exon1879,680880,00202323 
    ATGGACGCAAGTGATAAGAACTGCGGCTGGGAATGCGGTAAGGCGAATGCGGCGGATGCT
GAGAGACCAGACGGCTCCAATCCATTGTCGGACAGTGCTTGCTCCGGATCCGATGCTTCA
CCACGCCCAGCGGCGGATTCAGGGTTTGTGGCAATCTCCTTGTCTAGCCCGTCATTGGAT
GCTGCTGCTTCGTCGTCAAACAGCGAGAAATTCTCTTCGGAGGAAGTCGCCACGCTTGCT
CGGTGTCTATGTGCTCCTCTCGTCTCGATTCGCGTTGGAAGAATTGTCAGCCATGGCTAC
TTTCTTCGTCCAACAAATTCAAG
     Intron 1-2880,003880,07169 
    gtatagcgtaagatctttgtgattt..........ctctttctcttttcttttgccgcag
    2EFJ17332.exon2880,072880,32120250 
    GGGTCACCTCGATCTGACGATGCTGCCCAGCTCCGACTTCCGTCTCTCATTCCTGGGCGA
TGATGGGACGATCGAAAGACTGGCTCTAGTTTCTTCGTCACCAATCCAAGGCTCTTTTCC
AGTTGAGCTGCAAGAAATCGCTACGGACTCTTCCGGCAGATCCTTCGTCCTCAAACTCGC
CTCAAACAGATCGGTGTTCTTCTGGCAATCGGAAAAGTCCAAAGCTCGTGGAGATGAGTT
AGTCCTCAAG
     Intron 2-3880,322880,40483 
    gtcagtcacatttttcttcatccct..........cgttcgtgcctttgttgtgctacag
    3EFJ17332.exon3880,405881,33700933 
    ATGAAAGATATCTTGCAACAAAGGCCAACCTTGTGTCAGCAGACAGGCATCCACGAGTCG
CGTCTCAAGTCGATCGCCAGCGGCTTGCAAACTTTGCCACCGTCTTCTTCGTACTCGTTT
TCTTCCGGCCCAGAAGCTCTGCTGCCAGGTTCTTTGCCACTTCCAAGTTTGAGCAATCCA
TTTGTTTGTTCGAGTGAAGGAGACGATGCTCCAAGCGCAGTGTGCTCGCAAGCGCTTGCG
GCAGCAGCAATAGGCATGTCCTTTGGCCTCGCCTCGTCGACTTCCACCACTGTTCCTGGC
TCCAGCTCCATCGCCGCGACGCTCTTCTCACTCAACCAGAGCCAGCGGCTGCTGAGAAGC
TCGGGAGAGCTCGACAAGAAGGCTTTCGCGCAGAGAATCCTTGGATCACTCCCACAGACC
TTCGTTCCATTCCCGCTCCTAGTAAGTGGCTCCGTAAGTGTTCCTAGCGTTCCTCTCTCG
GCAGTCGTGGCTCCTTACTACTGCCCATGTCCGCTTGGAGCCGCCTCGGCTTTGCAGTAC
TCGACTTTCACTTCTCACCTTCCATCGCTGGTTTCGTCCTCGGCAGCCGCTTCTTTCGTG
TCAGTCGGGCCGCCACCTCCGCTCCTTCCTCCTCTGGGTTTCTCGCTTCCTCTGGTTTCC
CCGGCCTCGGGCGTTTCTCTGGCCAGCGGACCTCTCATGGGTGTGGTTTTGCCGTGTCCG
CTGAAGCCCGAGTCGCCTAGCACCGGTGTGTTTCAAGGTGGTCTTGCCGATATACTTGGA
GTTTATAGCTCGAGCTTTCTTCCAACGAGTTTGGATCTTGGCAGGAACTTTTCATCGTCT
GGATTGACGAACTTGTATTGTCAGCCAGCTCTCGAGAACAACAGCAGCAGCAGCAGCAGC
GGTGGGATGATTTGGAGCAGCAATCTCTCACAC
     Intron 3-4881,338881,862525 
    gtaagtttcgatcgctctgaaaagt..........attcgaaaggtgtttgaagatgcag
    4EFJ17332.exon4881,863881,96400102 
    GGTGTTAGGAATGCCACCGCCGCAGTGCAGGAGAAGACCGGCAACGCGATGGCCAAGGCC
GGGGAGAAGATGGATTCGGCTAAGGCCTCGGGCACCGAGAAG
     Intron 4-5881,965882,159195 
    gtgagatttcccccctttctttaat..........attcattggtgtggtcttcgttcag
    5EFJ17332.exon5882,160882,56801409 
    GCTGAAAAGGTGACCGCGCACAACAAGGCCGAGAAGCACGAGGCCAAGGAGAGGAAGCAC
ATGAAGGAGGCGGAGGCGGCGGGACACCTCCACGAGAAGCAGGCGGAGAACATCGCCAAG
GCGGAGGAGAAGAAGCACGGGATTGGGCACCACGATACGGGGCTCGGCCACACCACCGGC
ACACACAATCCTCTGTCGACCGGCACCGGTCATACTGGCACGGGGACTCATACTGGCACA
CACACCGGTACACACAACCCCCTGTCGGGCGCCACCGGTCATACTGGCACGGGGACTCAC
ACCGGCACACACAACCCCCTGTCGGCCGCCACCGGCCATACTGGCACGGGCACCCACACC
GGCACCGGCCATACTGGCACGGGAGCTCACGTCCCCGGCACCCACACCG
     Intron 5-6882,569882,691123 
    gtactcacaccgggctttgaattga..........aattatctgtatcacgtgggtttag
    6EFJ17332.exon6882,692882,91210221 
    TAATGTTTCCAATTGAGTTAGCTGGGCGACCCGGGTCAGCTGGTCACCGTCGGTCAAAAG
ATTCGGGAAAGACGGCCGTGGTTCATGAGTTGGCAAGACTCTCGATAAACCAAGTGGATG
CCGATCTGGAGAAGGCGCCTTGCAGCGAGTATGTCTATTATTTGGACGGGATCGACGGGA
CTGACTTATCATTCTCCGGTGGAACGATAGAAGTTGGGTAA
    3' downstream sequence 
    tcattgcaaacacctatgaacttctctgaatggctacataggtgtttttc..........

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