Selaginella moellendorffii (v1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
SuperContig GL377607: 871,897-873,833 forward strand.
This transcript has 8 exons and is annotated with 25 domains and features.
This transcript is a product of gene SELMODRAFT_271403 Show transcript tableHide transcript table
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| No. | Exon / Intron | Start | End | Start Phase | End Phase | Length | Sequence |
|---|---|---|---|---|---|---|---|
| 5' upstream sequence |
..........aaattctcctaccaaaagtttttatttgctagcatattcgctgttgggat
| ||||||
| 1 | EFJ19091.exon1 | 871,897 | 872,531 | - | 1 | 635 |
TCCCTTCCTTCCTCGAAGAAGACGTCGTCTACCTGATGGGGTGCGTGTAATGTTTTTTTT CTAGGTAAGGGAGCGCTAGGGTTTGTGGCGAGAGAGGAAGCACCAAGGCGCTGGATCGGC GCTGCGGCACAGACGGTATGACATTCTAGTCCATCAGGCAGTGCTATCGATCGAGGCGAC CATGGAGAGCAGTAATCCGGCACCATCGCTCTCCTCTTCGTCGCACGCCCAGCTCCCGGC CAGGATTTCTAGCCTTCTCCCCGCCTCGTTCTCCAGGATTTCGAGCTTACTAGAGGTCTC GGGGCTGCTGAGAGGCGCTCCACAGGAACTAGGCCCTATGAACAGGGACAGGGACGAGAG TGGCGGAGCAGAGGTGTCGATCAGGATAATTGCCGACTCTGGGTCGCCGAGGGAGAGTGG CTCGGGGCGCCCGCGGGCGGCCGATTCGATTGTCCAGGACGAGCAGAGTGGTTCCGATAG AGAGCTGGAAACCGAGGAGTCCACCACAATTGCTACCGCTGCTGGCGATCGTGAGGCCGT GAGGTATGATTTCCAGCACCTAGCTAAATGGGTCGAGCAGATCCTCCCATTCTCGATTTT GTTGCTCGTGGTCTTCATACGCCAGCATCTCCAAG |
| Intron 1-2 | 872,532 | 872,601 | 70 |
gtctttttcttgtttttccttcgtt..........ctttgtggctttctttgtgttgaag
| |||
| 2 | EFJ19091.exon2 | 872,602 | 872,678 | 1 | 0 | 77 |
GTTTCCTTGTGACGCTTTGGATATCAGCTATTATGATCAAAGCGAATAGTCTTCTTCGTA AGCAGACGTCTCTAAGA |
| Intron 2-3 | 872,679 | 872,749 | 71 |
gtaagtgactaccatttttcttctc..........tatctttttcttcttcttctttcag
| |||
| 3 | EFJ19091.exon3 | 872,750 | 872,918 | 0 | 1 | 169 |
GGAGAGCGAAAAACGTACATTCTAGTGGTCCTTGCCGCATTTCTCATCCAACATGTCGAG GGTATATACTGGTGGTATCGTGCCGACGCTCTTTGGCGACCACTTGTTCTCCTCCCTCCG AAAGACATCCCAAACTTTGCGGACGCGTTTTTCAATATTGTTTTGAATG |
| Intron 3-4 | 872,919 | 872,983 | 65 |
gcaagcaaatcctatgacactctct..........atactttatattgtttctttctcag
| |||
| 4 | EFJ19091.exon4 | 872,984 | 873,072 | 1 | 0 | 89 |
ATACGATGGTCCGGTTGTCTGCCATGGCATTCAAGTGCGGTGTTCTTATATACTACAAGA AAGGCCGAGGACGTAACTATCGATGGCAG |
| Intron 4-5 | 873,073 | 873,128 | 56 |
gttagtttcttcaattagtttcgtc..........atcgtgattgtgtatctcgatgcag
| |||
| 5 | EFJ19091.exon5 | 873,129 | 873,293 | 0 | 0 | 165 |
GGCCAAATATTGACTCTCACCGAGTATGTTGTTCTACTTTATCGAACTGTAATACCAGGA CCAGTCTGGTACCGCTTCTTTTTAAACAAAGAGTATGGGAGCCTGTTTTCATCGCTGACA ACAGGATTATACCTCACCTTCAAAGTCACATCGGTCCTTGAGAAG |
| Intron 5-6 | 873,294 | 873,349 | 56 |
gcaagttttatgcctcccagttttc..........tctaaactttgtaaaaaccacacag
| |||
| 6 | EFJ19091.exon6 | 873,350 | 873,427 | 0 | 0 | 78 |
GTGCAAAAGTTCGCTACGGCAGTGAGATCGATTCTTCGCAGGGAAGTCCAATACGGTACA TATGCAACGCATGAAGAG |
| Intron 6-7 | 873,428 | 873,490 | 63 |
gtgaagccaattaactcgggctata..........caattgtgcacgatggatgttccag
| |||
| 7 | EFJ19091.exon7 | 873,491 | 873,594 | 0 | 2 | 104 |
GTGCTCGCGGTAGGAGATCTGTGCGCTATATGCCAGGAAAAGATGCACGCCCCGATATCC TTGCTGTGCAAGCACGTCTTTTGCGAGGATTGCGTCTCCGAGTG |
| Intron 7-8 | 873,595 | 873,666 | 72 |
gtacgtttcatcaaatcttctgtgc..........gtttttcttcgtttttgctacacag
| |||
| 8 | EFJ19091.exon8 | 873,667 | 873,833 | 2 | - | 167 |
GTTTGAGAGGGAGCGAACTTGTCCATTATGTCGATCGGTTGTGAAGTCGTCGGAGCTAAG ATCTTTTGGCGATGGCTCCACGAGTCTCTTTGTACAGCTCTTTTAAAGAGAGAAGGGGCC AGCCAGTAAACAAGATTTTCGTCCACACTCTTTTAGTTTAGTTTGTT |
| 3' downstream sequence |
aaccatgcggtgacgtggtgtccgatgtggaaaagccctaaccatctcat..........
|
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Ensembl Plants release 61 - May 2025 © EMBL-EBI EMBL-EBI
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