Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EFJ13874

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Description

Uncharacterized protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:D8SNY3]

Location

SuperContig GL377630: 650,449-650,979 forward strand.

About this transcript

This transcript has 2 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene SELMODRAFT_49051 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
-	EFJ13874	480	160aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D8SNY3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	1	126	-	3.40.1000.30	-
PANTHER	1	160	-	PTHR47602	-
CDD	124	160	-	cd22165	-
Gene3D	127	160	-	1.20.1280.50	-
PROSITE profiles	122	160	F-box domain	PS50181	IPR001810 [Display all genes with this domain]
Pfam	127	158	F-box domain	PF00646	IPR001810 [Display all genes with this domain]
Superfamily	123	159	F-box-like domain superfamily	SSF81383	IPR036047 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Feature type	Start	End
SignalP	1	26

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