Selaginella moellendorffii (v1.0)
Description

RBR-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D8T4F4]

Location
About this transcript

This transcript has 16 exons and is annotated with 26 domains and features.

Gene
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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
-EFJ084091933580aa
 
Protein coding
D8T4F4 -Ensembl Canonical

Domains

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  • Domain source
  • Start
  • End
  • Description
  • Accession
  • InterPro
Domain sourceStartEndDescriptionAccessionInterPro
Superfamily116196-SSF57850-
Superfamily188256-SSF57850-
CDD194258-cd20346-
Gene3D245500-1.20.120.1750-
Superfamily268316-SSF57850-
Pfam271311-PF22191-
CDD272326-cd22583-
Gene3D547579-2.30.30.380-
Pfam336497Ariadne domainPF19422IPR045840 [Display all genes with this domain]
PANTHER82369E3 ubiquitin ligase RBR familyPTHR11685IPR031127 [Display all genes with this domain]
Pfam4988E3 ubiquitin-protein ligase ARIH1-like, UBA-like domainPF21235IPR048962 [Display all genes with this domain]
Pfam187249IBR domainPF01485IPR002867 [Display all genes with this domain]
SMART187249IBR domainSM00647IPR002867 [Display all genes with this domain]
SMART253323IBR domainSM00647IPR002867 [Display all genes with this domain]
PROSITE profiles113327TRIAD supradomainPS51873IPR044066 [Display all genes with this domain]
PROSITE patterns231240Zinc finger, RING-type, conserved sitePS00518IPR017907 [Display all genes with this domain]
Gene3D112201Zinc finger, RING/FYVE/PHD-type3.30.40.10IPR013083 [Display all genes with this domain]
PROSITE profiles546577Zinc finger, RanBP2-typePS50199IPR001876 [Display all genes with this domain]
PROSITE patterns552571Zinc finger, RanBP2-typePS01358IPR001876 [Display all genes with this domain]
Superfamily549575Zinc finger, RanBP2-type superfamilySSF90209IPR036443 [Display all genes with this domain]

Other features

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  • Feature type
  • Start
  • End
Feature typeStartEnd
MobiDBLite501518
MobiDBLite501521
Seg417
Seg501548
Alphafold1580
Ncoils328355