Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Ensembl Plants is produced in collaboration with Gramene

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Transcript: EFJ24278

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Description

PHD finger protein ING [Source:UniProtKB/TrEMBL;Acc:D8QY36]

Location

SuperContig GL377590: 758,207-759,465 reverse strand.

About this transcript

This transcript has 7 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene SELMODRAFT_228279 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	EFJ24278	893	213aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D8QY36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Domains & features

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Domains

Original project that identified the domainDomain source	Start	End	Description	Accession	InterPro
Gene3D	4	112	-	6.10.140.1740	-
CDD	14	111	-	cd17015	-
CDD	160	206	-	cd15587	-
PANTHER	6	123	ING family	PTHR10333	IPR028651 [Display all genes with this domain]
Pfam	6	113	Inhibitor of growth protein, N-terminal histone-binding	PF12998	IPR024610 [Display all genes with this domain]
SMART	6	114	Inhibitor of growth protein, N-terminal histone-binding	SM01408	IPR024610 [Display all genes with this domain]
Superfamily	147	208	Zinc finger, FYVE/PHD-type	SSF57903	IPR011011 [Display all genes with this domain]
PROSITE profiles	158	207	Zinc finger, PHD-finger	PS50016	IPR019787 [Display all genes with this domain]
SMART	160	205	Zinc finger, PHD-type	SM00249	IPR001965 [Display all genes with this domain]
PROSITE patterns	161	204	Zinc finger, PHD-type, conserved site	PS01359	IPR019786 [Display all genes with this domain]
Gene3D	151	208	Zinc finger, RING/FYVE/PHD-type	3.30.40.10	IPR013083 [Display all genes with this domain]

Other features

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Feature type
Start
End

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Filter

Feature type	Start	End
MobiDBLite	122	151
Seg	59	68
Ncoils	21	41
Ncoils	104	124

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