Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: Pp3c5_3280

.

Location

Chromosome 5: 2,126,292-2,130,150 forward strand.

About this gene

This gene has 8 transcripts (splice variants), 194 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c5_3280V3.5	2217	492aa	Pp3c5_3280V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DUZ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c5_3280V3.8	2229	365aa	Pp3c5_3280V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DU91	-
-	Pp3c5_3280V3.7	2205	488aa	Pp3c5_3280V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FR15	-
-	Pp3c5_3280V3.6	2039	488aa	Pp3c5_3280V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FR15	-
-	Pp3c5_3280V3.3	2030	400aa	Pp3c5_3280V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KIB1	-
-	Pp3c5_3280V3.1	1854	400aa	Pp3c5_3280V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KIB1	-
-	Pp3c5_3280V3.4	1727	368aa	Pp3c5_3280V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DXC4	-
-	Pp3c5_3280V3.2	1614	400aa	Pp3c5_3280V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KIB1	-

.

Summary

.

.