Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: Pp3c1_39520

.

Location

Chromosome 1: 27,499,295-27,501,841 reverse strand.

About this gene

This gene has 10 transcripts (splice variants), 174 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_39520V3.1	2050	403aa	Pp3c1_39520V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBL5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_39520V3.6	2213	280aa	Pp3c1_39520V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BVI1	-
-	Pp3c1_39520V3.9	2176	309aa	Pp3c1_39520V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FCB6	-
-	Pp3c1_39520V3.8	2171	309aa	Pp3c1_39520V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FCB6	-
-	Pp3c1_39520V3.5	2139	280aa	Pp3c1_39520V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BVI1	-
-	Pp3c1_39520V3.7	2102	309aa	Pp3c1_39520V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FCB6	-
-	Pp3c1_39520V3.4	2089	280aa	Pp3c1_39520V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BVI1	-
-	Pp3c1_39520V3.3	2084	280aa	Pp3c1_39520V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BVI1	-
-	Pp3c1_39520V3.2	2015	280aa	Pp3c1_39520V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BVI1	-
-	Pp3c1_39520V3.10	1834	403aa	Pp3c1_39520V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBL5	-

.

Summary

.

.