Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_22950

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Location

Chromosome 1: 16,973,580-16,981,443 reverse strand.

About this gene

This gene has 17 transcripts (splice variants) and 53 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_22950V3.3	3659	780aa	Pp3c1_22950V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FB15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_22950V3.6	4428	765aa	Pp3c1_22950V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FBE4	-
-	Pp3c1_22950V3.13	4330	766aa	Pp3c1_22950V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQA1	-
-	Pp3c1_22950V3.9	4173	677aa	Pp3c1_22950V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB1	-
-	Pp3c1_22950V3.11	4170	676aa	Pp3c1_22950V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L9A6	-
-	Pp3c1_22950V3.5	3964	765aa	Pp3c1_22950V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FBE4	-
-	Pp3c1_22950V3.15	3853	689aa	Pp3c1_22950V3.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQ77	-
-	Pp3c1_22950V3.17	3808	771aa	Pp3c1_22950V3.17	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BRI5	-
-	Pp3c1_22950V3.4	3672	765aa	Pp3c1_22950V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FBE4	-
-	Pp3c1_22950V3.7	3663	689aa	Pp3c1_22950V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQ77	-
-	Pp3c1_22950V3.14	3561	689aa	Pp3c1_22950V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQ77	-
-	Pp3c1_22950V3.10	3414	676aa	Pp3c1_22950V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L9A6	-
-	Pp3c1_22950V3.1	3413	676aa	Pp3c1_22950V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L9A6	-
-	Pp3c1_22950V3.2	3367	780aa	Pp3c1_22950V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FB15	-
-	Pp3c1_22950V3.12	3214	766aa	Pp3c1_22950V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQA1	-
-	Pp3c1_22950V3.8	3057	677aa	Pp3c1_22950V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB1	-
-	Pp3c1_22950V3.16	2680	780aa	Pp3c1_22950V3.16	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4FB15	-

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Summary

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