Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c3_16880

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Location

Chromosome 3: 11,846,857-11,854,697 reverse strand.

About this gene

This gene has 15 transcripts (splice variants), 344 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c3_16880V3.15	4674	790aa	Pp3c3_16880V3.15	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D8H7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c3_16880V3.8	4604	790aa	Pp3c3_16880V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D8H7	-
-	Pp3c3_16880V3.7	4394	790aa	Pp3c3_16880V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D8H7	-
-	Pp3c3_16880V3.2	4363	660aa	Pp3c3_16880V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KUW8	-
-	Pp3c3_16880V3.3	4197	666aa	Pp3c3_16880V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D8F5	-
-	Pp3c3_16880V3.14	4172	790aa	Pp3c3_16880V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D8H7	-
-	Pp3c3_16880V3.1	4153	660aa	Pp3c3_16880V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KUW8	-
-	Pp3c3_16880V3.5	3955	677aa	Pp3c3_16880V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DAE5	-
-	Pp3c3_16880V3.11	3888	677aa	Pp3c3_16880V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DAE5	-
-	Pp3c3_16880V3.6	3798	790aa	Pp3c3_16880V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D8H7	-
-	Pp3c3_16880V3.12	3744	790aa	Pp3c3_16880V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4D8H7	-
-	Pp3c3_16880V3.13	3564	730aa	Pp3c3_16880V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DFQ2	-
-	Pp3c3_16880V3.9	3558	730aa	Pp3c3_16880V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DFQ2	-
-	Pp3c3_16880V3.4	3463	677aa	Pp3c3_16880V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DAE5	-
-	Pp3c3_16880V3.10	3405	677aa	Pp3c3_16880V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4DAE5	-

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Summary

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