Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c20_5090

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Location

Chromosome 20: 3,049,985-3,053,998 reverse strand.

About this gene

This gene has 10 transcripts (splice variants), 1 orthologue and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c20_5090V3.1	2510	306aa	Pp3c20_5090V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1IU29	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c20_5090V3.4	2876	221aa	Pp3c20_5090V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4Y3	-
-	Pp3c20_5090V3.2	2507	305aa	Pp3c20_5090V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4K5	-
-	Pp3c20_5090V3.3	1900	221aa	Pp3c20_5090V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4Y3	-
-	Pp3c20_5090V3.6	1897	220aa	Pp3c20_5090V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C1T3	-
-	Pp3c20_5090V3.5	1577	216aa	Pp3c20_5090V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C857	-
-	Pp3c20_5090V3.7	1574	215aa	Pp3c20_5090V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C1I2	-
-	Pp3c20_5090V3.8	1488	220aa	Pp3c20_5090V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C1T3	-
-	Pp3c20_5090V3.9	1149	205aa	Pp3c20_5090V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C1F5	-
-	Pp3c20_5090V3.10	1088	205aa	Pp3c20_5090V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C1F5	-

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Summary

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