Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_38820

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Location

Chromosome 1: 26,948,592-26,954,056 reverse strand.

About this gene

This gene has 11 transcripts (splice variants), 1234 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_38820V3.6	3987	729aa	Pp3c1_38820V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BW11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_38820V3.1	4417	726aa	Pp3c1_38820V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBG9	-
-	Pp3c1_38820V3.10	4341	726aa	Pp3c1_38820V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBG9	-
-	Pp3c1_38820V3.9	4042	726aa	Pp3c1_38820V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBG9	-
-	Pp3c1_38820V3.5	3895	664aa	Pp3c1_38820V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4N5	-
-	Pp3c1_38820V3.4	3760	664aa	Pp3c1_38820V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4N5	-
-	Pp3c1_38820V3.3	3758	664aa	Pp3c1_38820V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4N5	-
-	Pp3c1_38820V3.8	3753	726aa	Pp3c1_38820V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBG9	-
-	Pp3c1_38820V3.7	3667	726aa	Pp3c1_38820V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1LBG9	-
-	Pp3c1_38820V3.2	3606	664aa	Pp3c1_38820V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4C4N5	-
-	Pp3c1_38820V3.11	3351	723aa	Pp3c1_38820V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BVI0	-

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Summary

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