Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_210

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Location

Chromosome 1: 145,928-151,500 reverse strand.

About this gene

This gene has 16 transcripts (splice variants), 481 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Pp3c1_210V3.1	4650	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_210V3.9	4674	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-
-	Pp3c1_210V3.16	4556	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	-
-	Pp3c1_210V3.8	4544	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-
-	Pp3c1_210V3.15	4487	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	-
-	Pp3c1_210V3.7	4475	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-
-	Pp3c1_210V3.14	4352	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	-
-	Pp3c1_210V3.6	4340	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-
-	Pp3c1_210V3.13	4070	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	-
-	Pp3c1_210V3.5	4058	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-
-	Pp3c1_210V3.12	4011	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	-
-	Pp3c1_210V3.4	3999	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-
-	Pp3c1_210V3.11	3942	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	-
-	Pp3c1_210V3.3	3930	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-
-	Pp3c1_210V3.10	3701	872aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1L6G6	-
-	Pp3c1_210V3.2	3689	868aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4BQB5	-

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Plant Compara

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data