Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: Pp3c17_19880

.

Location

Chromosome 17: 13,307,659-13,311,038 forward strand.

About this gene

This gene has 5 transcripts (splice variants) and 138 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	Flags
-	Pp3c17_19880V3.5	2796	337aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SCG2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c17_19880V3.4	2569	337aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SCG2	-
-	Pp3c17_19880V3.1	2549	337aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SCG2	-
-	Pp3c17_19880V3.2	2272	261aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7I4B8C5	-
-	Pp3c17_19880V3.3	2177	337aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SCG2	-

.

Plant Compara

.

Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data