Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c9_20540

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Location

Chromosome 9: 13,913,710-13,918,179 reverse strand.

About this gene

This gene has 14 transcripts (splice variants), 243 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c9_20540V3.13	3258	543aa	Pp3c9_20540V3.13	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c9_20540V3.9	3227	538aa	Pp3c9_20540V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3Z4	-
-	Pp3c9_20540V3.12	3180	543aa	Pp3c9_20540V3.12	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c9_20540V3.4	3178	517aa	Pp3c9_20540V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c9_20540V3.8	3149	538aa	Pp3c9_20540V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3Z4	-
-	Pp3c9_20540V3.3	3086	517aa	Pp3c9_20540V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c9_20540V3.11	2963	543aa	Pp3c9_20540V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c9_20540V3.7	2948	538aa	Pp3c9_20540V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3Z4	-
-	Pp3c9_20540V3.1	2919	538aa	Pp3c9_20540V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3Z4	-
-	Pp3c9_20540V3.10	2885	543aa	Pp3c9_20540V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c9_20540V3.6	2870	538aa	Pp3c9_20540V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3Z4 A9TTI6	-
-	Pp3c9_20540V3.2	2861	535aa	Pp3c9_20540V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c9_20540V3.5	2708	538aa	Pp3c9_20540V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K3Z4	-
-	Pp3c9_20540V3.14	2320	491aa	Pp3c9_20540V3.14	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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