Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TOP6A Pp3c8_12030

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Location

Chromosome 8: 7,729,214-7,732,541 reverse strand.

About this gene

This gene has 15 transcripts (splice variants), 146 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
TOP6A-214	Pp3c8_12030V3.15	2805	432aa	PAC:32964298.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
TOP6A-201	Pp3c8_12030V3.14	2654	432aa	PAC:32964297.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-202	Pp3c8_12030V3.13	2631	432aa	PAC:32964296.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-206	Pp3c8_12030V3.12	2494	432aa	PAC:32964295.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-204	Pp3c8_12030V3.11	2327	432aa	PAC:32964294.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-212	Pp3c8_12030V3.10	2276	432aa	PAC:32964293.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-215	Pp3c8_12030V3.9	2178	432aa	PAC:32964292.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-213	Pp3c8_12030V3.8	2123	432aa	PAC:32964291.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-210	Pp3c8_12030V3.7	2036	432aa	PAC:32964290.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-203	Pp3c8_12030V3.6	2027	432aa	PAC:32964289.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-207	Pp3c8_12030V3.5	2002	432aa	PAC:32964288.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-211	Pp3c8_12030V3.4	1984	432aa	PAC:32964287.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-205	Pp3c8_12030V3.3	1902	432aa	PAC:32964286.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-208	Pp3c8_12030V3.2	1900	432aa	PAC:32964285.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-
TOP6A-209	Pp3c8_12030V3.1	1859	432aa	PAC:32964284.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1K6W2	-

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Summary

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