Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c5_19870

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Location

Chromosome 5: 13,981,105-13,991,082 forward strand.

About this gene

This gene has 11 transcripts (splice variants), 42 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c5_19870V3.1	5341	594aa	Pp3c5_19870V3.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c5_19870V3.3	4781	468aa	Pp3c5_19870V3.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_19870V3.9	4524	594aa	Pp3c5_19870V3.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	-
-	Pp3c5_19870V3.2	4463	468aa	Pp3c5_19870V3.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	Pp3c5_19870V3.8	4304	594aa	Pp3c5_19870V3.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	-
-	Pp3c5_19870V3.7	3986	594aa	Pp3c5_19870V3.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	-
-	Pp3c5_19870V3.6	3728	594aa	Pp3c5_19870V3.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	-
-	Pp3c5_19870V3.5	3723	594aa	Pp3c5_19870V3.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	-
-	Pp3c5_19870V3.4	3678	594aa	Pp3c5_19870V3.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	-
-	Pp3c5_19870V3.11	3563	594aa	Pp3c5_19870V3.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2K1KKC2	-
-	Pp3c5_19870V3.10	2692	577aa	Pp3c5_19870V3.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9SM60	-

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Summary

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