Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: Pp3c1_4130

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Location

Chromosome 1: 3,103,277-3,106,075 reverse strand.

About this gene

This gene has 10 transcripts (splice variants), 1248 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Pp3c1_4130V3.9	2059	290aa	PAC:32970922.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	Pp3c1_4130V3.8	1680	290aa	PAC:32970921.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.7	1607	290aa	PAC:32970920.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.6	1598	290aa	PAC:32970919.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.5	1551	290aa	PAC:32970918.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.4	1530	290aa	PAC:32970917.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.3	1516	290aa	PAC:32970916.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.10	1457	290aa	PAC:32970923.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.2	1445	290aa	PAC:32970915.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-
-	Pp3c1_4130V3.1	1297	290aa	PAC:32970914.CDS.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9S3B7	-

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Summary

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